RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MBL2P11226 248 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PRPS2P11908 318 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 RPS6KA3P51812 740 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 CCL23P55773 120 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ATP11AP98196 1134 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ZFP36L1Q07352 338 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 RCAN2Q14206 197 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SPARCL1Q14515 664 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 TANGO2Q6ICL3 276 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 CES5AQ6NT32 575 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 NPNTQ6UXI9 565 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ARHGAP36Q6ZRI8 547 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 OVCH2Q7RTZ1 564 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 FAM131BQ86XD5 332 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF547Q8IVP9 402 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ZC3H7AQ8IWR0 971 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 FAM71DQ8N9W8 422 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PPFIBP2Q8ND30 876 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 BHLHE22Q8NFJ8 381 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 VPS39Q96JC1 886 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SLC6A18Q96N87 628 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PELOQ9BRX2 385 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 TRIM51Q9BSJ1 452 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 RTKNQ9BST9 563 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 WACQ9BTA9 647 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF768Q9H5H4 540 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 BCL2L10Q9HD36 194 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 VWA7Q9Y334 891 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PCDHA9Q9Y5H5 950 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 GMPPBQ9Y5P6 360 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 RAI1Q7Z5J4 1906 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 IGKV3D-11A0A0A0MRZ8 115 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 OR6C76A6NM76 312 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 H7BY64 318 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PSMD12O00232 456 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 TXNDC9O14530 226 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 MGRN1O60291 552 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 KAT7O95251 611 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF7P17097 686 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 NR1D1P20393 614 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PAX7P23759 505 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ATXN1P54253 815 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 NAP1L1P55209 391 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 BCL2L1Q07817 233 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 HYAL2Q12891 473 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 CST6Q15828 149 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 UNC50Q53HI1 259 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 WASHC2DQ5SRD0 308 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 AADACL2Q6P093 401 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 DNAJC22Q8N4W6 341 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SLC15A4Q8N697 577 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 C1orf52Q8N6N3 182 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 RPS4Y2Q8TD47 263 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 DIO2Q92813 273 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 TCEAL4Q96EI5 215 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 LIN37Q96GY3 246 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SECISBP2Q96T21 854 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SEPHS2Q99611 448 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 YIPF2Q9BWQ6 316 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 CLMPQ9H6B4 373 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SAYSD1Q9NPB0 183 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 EXOSC3Q9NQT5 275 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 AIG1Q9NVV5 245 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 USE1Q9NZ43 259 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SLC7A8Q9UHI5 535 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 CES1P1Q9UKY3 287 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SLC8A2Q9UPR5 921 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 GPR45Q9Y5Y3 372 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 A0A0A6YYD5 115 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 C15orf38-AP3S2A0A0A6YYH1 394 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SPTY2D1-AS1A0A0U1RR47 76 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 C1orf226A1L170 272 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 FADS2P1A8MWK0 482 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 RNF223E7ERA6 249 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 C1orf105O95561 183 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 TBX6O95947 436 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 SOX18P35713 384 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PCBP4P57723 403 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 MPP1Q00013 466 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 MGAT5BQ3V5L5 792 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 CASC4Q6P4E1 433 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 IGFL2Q6UWQ7 119 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF852Q6ZMS4 543 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ARMCX6Q7L4S7 300 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 MAVSQ7Z434 540 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 ARPINQ7Z6K5 226 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM25Q86YD3 366 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 CLDN22Q8N7P3 220 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 GDAP1Q8TB36 358 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 STAG3L4Q8TBR4 150 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 CAPZA3Q96KX2 299 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 LGMNQ99538 433 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 LMF2Q9BU23 707 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 BTBD2Q9BX70 525 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PARVBQ9HBI1 364 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 EML4Q9HC35 981 aaKnown RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 PFDN4Q9NQP4 134 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 RASSF1Q9NS23 344 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 H2AFY2Q9P0M6 372 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-212ENST00000549162 HCSTQ9UBK5 93 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms