RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PRLP01236 227 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 ELNP15502 786 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 PTPN2P17706 415 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 CCND3P30281 292 aaPredicted RBP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 CASP3P42574 277 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 MRPS6P82932 125 aaKnown RBP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 SLC14A1Q13336 389 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 ZNF181Q2M3W8 571 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 PLEKHG6Q3KR16 790 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 OR2T5Q6IEZ7 315 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 ZNF551Q7Z340 670 aaPredicted RBP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 GLB1L3Q8NCI6 653 aaPredicted RBP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 OR7D4Q8NG98 312 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 OR2T29Q8NH02 315 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 ZNF486Q96H40 463 aaPredicted RBP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 MGME1Q9BQP7 344 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 TP63Q9H3D4 680 aaPredicted RBP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 CCNB1IP1Q9NPC3 277 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 ERVW-1Q9UQF0 538 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 VPS9D1Q9Y2B5 631 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 TNPO3Q9Y5L0 923 aaKnown RBP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 DRGXA6NNA5 263 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 AIREO43918 545 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 TLR5O60602 858 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 PGLSO95336 258 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 C1QCP02747 245 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 DBTP11182 482 aaKnown RBP13.39□□□□□ -0.27
HDAC7-228ENST00000548938 IL1RNP18510 177 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 HOXD9P28356 352 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-228ENST00000548938 GRK4P32298 578 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 NEK2P51955 445 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 CREMQ03060 361 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 NOGQ13253 232 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 CACHD1Q5VU97 1274 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 ALG1LQ6GMV1 187 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 TAS2R42Q7RTR8 314 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 SLC38A4Q969I6 547 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 SIGLEC11Q96RL6 698 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 ITPAQ9BY32 194 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 TNKS2Q9H2K2 1166 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 MMP27Q9H306 513 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 ANKHQ9HCJ1 492 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 SERHLQ9NQF3 203 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 RNF186Q9NXI6 227 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 PDP1Q9P0J1 537 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-228ENST00000548938 CAB39Q9Y376 341 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-228ENST00000548938 TAPBPO15533 448 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 PCDHGA12O60330 932 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 S100BP04271 92 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-228ENST00000548938 LPOP22079 712 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-228ENST00000548938 CDKN2CP42773 168 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 GNPDA1P46926 289 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 YBEYP58557 167 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-228ENST00000548938 NADSYN1Q6IA69 706 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 ADAMTSL2Q86TH1 951 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 RGL4Q8IZJ4 473 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 PROX1Q92786 737 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 PDLIM5Q96HC4 596 aaKnown RBP13.39□□□□□ -0.27
HDAC7-228ENST00000548938 LRTM1Q9HBL6 345 aa13.39□□□□□ -0.27
HDAC7-228ENST00000548938 SAGE2PA6NJ88 616 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 DYRK3O43781 588 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 BCKDHAP12694 445 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
HDAC7-228ENST00000548938 GADD45AP24522 165 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 NKX3-2P78367 333 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 NDUFA5Q16718 116 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 MMAAQ8IVH4 418 aaKnown RBP13.38□□□□□ -0.27
HDAC7-228ENST00000548938 RAVER1Q8IY67 606 aaKnown RBP13.38□□□□□ -0.27
HDAC7-228ENST00000548938 SYTL1Q8IYJ3 562 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 C17orf50Q8WW18 174 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 APH1BQ8WW43 257 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 DNASE1L2Q92874 299 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 KRT84Q9NSB2 600 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 KIF17Q9P2E2 1029 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 ZNF490Q9ULM2 529 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-228ENST00000548938 PCDHGC4Q9Y5F7 938 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 SLC12A8A0AV02 714 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 MOXD2PA6NHM9 499 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 M0QZ92 97 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 TAF4O00268 1085 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 RAD51BO15315 384 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 PTTG1O95997 202 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 ASGR1P07306 291 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 CD9P21926 228 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 PPP3CCP48454 512 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 ARHGDIAP52565 204 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 VLDLRP98155 873 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 SP3Q02447 781 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 MAD2L1Q13257 205 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-228ENST00000548938 KCNA10Q16322 511 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 TPRG1LQ5T0D9 272 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 UBE2UQ5VVX9 321 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 KIAA1614Q5VZ46 1190 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 SPATC1Q76KD6 591 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 VTCN1Q7Z7D3 282 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 SERINC5Q86VE9 423 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 ATG16L2Q8NAA4 619 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 ATL1Q8WXF7 558 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms