RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SPC25Q9HBM1 224 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 GIN1Q9NXP7 522 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 AFF4Q9UHB7 1163 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 WDR37Q9Y2I8 494 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 TMEM189-UBE2V1I3L0A0 370 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 INPPL1O15357 1258 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 COCHO43405 550 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 LCKP06239 509 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 HUNKP57058 714 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 IL18R1Q13478 541 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 DGUOKQ16854 277 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 RFX4Q33E94 735 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 PAGE2Q7Z2X7 111 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 TMEM132CQ8N3T6 1108 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 RNF175Q8N4F7 328 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 OR6Q1Q8NGQ2 317 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 TRIB2Q92519 343 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 PYCR2Q96C36 320 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZNF641Q96N77 438 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 PDP1Q9P0J1 537 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 LHX3Q9UBR4 397 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 SYN3O14994 580 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 FAM20BO75063 409 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 CNOT3O75175 753 aaKnown RBP13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 ERN1O75460 977 aaKnown RBP13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 DNAJB5O75953 348 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 CYBAP13498 195 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 MBTPS1Q14703 1052 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZC3H12BQ5HYM0 836 aaKnown RBP13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 TAS1R1Q7RTX1 841 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 CCDC71Q8IV32 467 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZBTB2Q8N680 514 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 PAF1Q8N7H5 531 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 C2orf69Q8N8R5 385 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 S100ZQ8WXG8 99 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 KCNH6Q9H252 994 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 ACOT13Q9NPJ3 140 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 NECTIN3Q9NQS3 549 aa13.77□□□□□ -0.2
RAPGEF3-218ENST00000548919 A0A096LPI6 279 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 GLTPD2A6NH11 291 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 STC2O76061 302 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 EBLN1P0CF75 366 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 EPORP19235 508 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 DGKAP23743 735 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 HOXA9P31269 272 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 KRT20P35900 424 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 RHOAP61586 193 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 VLDLRP98155 873 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 GPR17Q13304 367 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 NFATC2Q13469 925 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 CARTPTQ16568 116 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 HIST2H2ACQ16777 129 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 TRIM71Q2Q1W2 868 aaKnown RBP13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 LRIF1Q5T3J3 769 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 OR4F3Q6IEY1 312 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 OR2T5Q6IEZ7 315 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 CAPN13Q6MZZ7 669 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 AHSA2Q719I0 299 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 SNX20Q7Z614 316 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 SAPCD2Q86UD0 394 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 SLC22A16Q86VW1 577 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 TTC29Q8NA56 475 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 SETD9Q8NE22 299 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 OR2T29Q8NH02 315 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 USP7Q93009 1102 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 SPATA17Q96L03 361 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 DPH2Q9BQC3 489 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 ASPSCR1Q9BZE9 553 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 IL26Q9NPH9 171 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 TPRKBQ9Y3C4 175 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 OR6C75A6NL08 312 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 ADAM12O43184 909 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 CLDN7O95471 211 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 JUNDP17535 347 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 EFNA1P20827 205 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 MAGEA2P43356 314 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 FAM189BP81408 668 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 KDM4DQ6B0I6 523 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 C17orf99Q6UX52 265 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 FKBP9P1Q75LS8 142 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 TMEM173Q86WV6 379 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 CARNMT1Q8N4J0 409 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 PSMA8Q8TAA3 256 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 SELENOMQ8WWX9 145 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 LGALS12Q96DT0 336 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 ITPKCQ96DU7 683 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 NTMT1Q9BV86 223 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 EBPLQ9BY08 206 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 FBXO8Q9NRD0 319 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 SIRT5Q9NXA8 310 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 SCN3BQ9NY72 215 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 TRPS1Q9UHF7 1281 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 SLCO3A1Q9UIG8 710 aa13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 RBMX2Q9Y388 322 aaKnown RBP13.77□□□□□ -0.21
RAPGEF3-218ENST00000548919 A0A1B0GVM2 712 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 HTR3EA5X5Y0 456 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 TTC34A8MYJ7 566 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms