RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 C11orf96Q7Z7L8 435 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 RBM23Q86U06 439 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 DCAF4L2Q8NA75 395 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 OR4K1Q8NGD4 311 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 SH3KBP1Q96B97 665 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 NRBF2Q96F24 287 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 SUV39H2Q9H5I1 410 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 CFAP20Q9Y6A4 193 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 WNT6Q9Y6F9 365 aa13.32□□□□□ -0.28
PRPF40B-209ENST00000548825 M0R129 80 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 C8AP07357 584 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 CST5P28325 142 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 SOAT1P35610 550 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 OR1E2P47887 323 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 RPL26P61254 145 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 ACSM2AQ08AH3 577 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 ACSM2BQ68CK6 577 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 TMEM132CQ8N3T6 1108 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 HM13Q8TCT9 377 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 LHPPQ9H008 270 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 PTBP2Q9UKA9 531 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 GAPDHSO14556 408 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 FPGTO14772 594 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 INMTO95050 263 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 SERPIND1P05546 499 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 GGT1P19440 569 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 MSH3P20585 1137 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 EPHA2P29317 976 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 CRATP43155 626 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 ALDH3A2P51648 485 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 CLCN4P51793 760 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 NUP107P57740 925 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 ACOX1Q15067 660 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 C11orf91Q3C1V1 193 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 PLPP4Q5VZY2 271 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 CHST9Q7L1S5 443 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 TMEM150AQ86TG1 271 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 MCOLN3Q8TDD5 553 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 TTLL2Q9BWV7 592 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 PDP1Q9P0J1 537 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 SAMHD1Q9Y3Z3 626 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 BOLA2-SMG1P6H3BVE0 249 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 SRCP12931 536 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 ENGP17813 658 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 CCNA2P20248 432 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 POU1F1P28069 291 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 NSG1P42857 185 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 KIR3DL1P43629 444 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 IDH2P48735 452 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 CD47Q08722 323 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 ARSIQ5FYB1 569 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 BROXQ5VW32 411 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 GRAMD4Q6IC98 578 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 NEK5Q6P3R8 708 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 CRTC3Q6UUV7 619 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 TRAPPC5Q8IUR0 188 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 MICU2Q8IYU8 434 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 TMCO5AQ8N6Q1 288 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 PSD4Q8NDX1 1056 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 RIOK2Q9BVS4 552 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 ABCG2Q9UNQ0 655 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 OARD1Q9Y530 152 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 SNX8Q9Y5X2 465 aa13.31□□□□□ -0.28
PRPF40B-209ENST00000548825 MYO10Q9HD67 2058 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 SLC28A1O00337 649 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 CSF2RAP15509 400 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 JAK1P23458 1154 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 ARHGDIAP52565 204 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 RAD23AP54725 363 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 C21orf59P57076 290 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 NECAB2Q7Z6G3 386 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 HMGN2P46Q86SG4 172 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 TMPRSS11BQ86T26 416 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 ARL10Q8N8L6 244 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 UHRF1Q96T88 793 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 KCTD5Q9NXV2 234 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 KIAA1522Q9P206 1035 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 CXCL14O95715 111 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 SOD2P04179 222 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 HSMCR30P0CW71 290 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 NUDT6P53370 316 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 PTSQ03393 145 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 PCBP2Q15366 365 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 INO80DQ53TQ3 878 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 TRMT11Q7Z4G4 463 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 UTP15Q8TED0 518 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 ZNF296Q8WUU4 475 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 REXO5Q96IC2 774 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 NRTNQ99748 197 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 OSBPL6Q9BZF3 934 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 AMBRA1Q9C0C7 1298 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 SLC32A1Q9H598 525 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 ACSL6Q9UKU0 697 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 TESMINQ9Y4I5 508 aa13.3□□□□□ -0.28
PRPF40B-209ENST00000548825 ANKRD36A6QL64 1941 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms