RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ADRA1AP35348 466 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 NSG1P42857 185 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 KIR3DL1P43629 444 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 ZNF140P52738 457 aaPredicted RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 ARSFP54793 590 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 HADHBP55084 474 aaKnown RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 CASP6P55212 293 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 KCNK10P57789 538 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 SRSF11Q05519 484 aaKnown RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 RBPJQ06330 500 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 CACNG1Q06432 222 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 AIMP2Q13155 320 aaKnown RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 SPARCL1Q14515 664 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 SLC9A5Q14940 896 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 BRD3Q15059 726 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 DEFB110Q30KQ9 67 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 NKAIN1Q4KMZ8 207 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 ZNF789Q5FWF6 425 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 C11orf63Q6NUN7 778 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 GFRALQ6UXV0 394 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 UNC5AQ6ZN44 842 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 CXXC5Q7LFL8 322 aaKnown RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 TRIM73Q86UV7 250 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 TBC1D21Q8IYX1 336 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 ZNF655Q8N720 491 aaPredicted RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 CCDC110Q8TBZ0 833 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 ACTL9Q8TC94 416 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 DNAJC1Q96KC8 554 aaKnown RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 CALR3Q96L12 384 aaKnown RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 SPATA13Q96N96 652 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 GBP5Q96PP8 586 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 EPS8L2Q9H6S3 715 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 OR6C2Q9NZP2 312 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 CDYLQ9Y232 598 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 EFR3BQ9Y2G0 817 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 RPH3AQ9Y2J0 694 aaPredicted RBP8.15□□□□□ -1.1
TROAP-208ENST00000548817 CSAG2Q9Y5P2 127 aa8.15□□□□□ -1.1
TROAP-208ENST00000548817 NUP210LQ5VU65 1888 aa8.15□□□□□ -1.11
TROAP-208ENST00000548817 IGLV3-16A0A075B6K0 115 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 ESPNB1AK53 854 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 AGPSO00116 658 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 CCL22O00626 93 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 IPO7O95373 1038 aaKnown RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 AP2A1O95782 977 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 RPN2P04844 631 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 TPH1P17752 444 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 MSNP26038 577 aaKnown RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 DNAJA1P31689 397 aaKnown RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 CYLC1P35663 651 aaPredicted RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 PPARGP37231 505 aaPredicted RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 ADORA2A-AS1P86434 159 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 FOLH1Q04609 750 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 Q0VFX4 171 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 OLIG2Q13516 323 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 ITIH4Q14624 930 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 KIR2DS3Q14952 304 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 HIF1AQ16665 826 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 SLC5A12Q1EHB4 618 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 AGAP7PQ5VUJ5 663 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 ZNF385CQ66K41 422 aaPredicted RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 TTC23LQ6PF05 361 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 CLDN19Q8N6F1 224 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 TTC29Q8NA56 475 aaPredicted RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 OR5AR1Q8NGP9 310 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 GSDMBQ8TAX9 411 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 STYXQ8WUJ0 223 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 SLC22A18Q96BI1 424 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 CDKN2AIPNLQ96HQ2 116 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 AGAP4Q96P64 663 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 OR2A14Q96R47 310 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 TSSK1BQ9BXA7 367 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 OSBPL8Q9BZF1 889 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 CHRNA10Q9GZZ6 450 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 GOLPH3Q9H4A6 298 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 GSX1Q9H4S2 264 aaPredicted RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 LRRC40Q9H9A6 602 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 ARNT2Q9HBZ2 717 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 FAM60AQ9NP50 221 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 INTS7Q9NVH2 962 aaKnown RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 NLE1Q9NVX2 485 aaPredicted RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 DHCR7Q9UBM7 475 aaKnown RBP8.14□□□□□ -1.11
TROAP-208ENST00000548817 TNFRSF10DQ9UBN6 386 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 CDC23Q9UJX2 597 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 ICKQ9UPZ9 632 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 PCDHGB6Q9Y5F9 930 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 PCDHA13Q9Y5I0 950 aa8.14□□□□□ -1.11
TROAP-208ENST00000548817 MXRA5Q9NR99 2828 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 DOCK10Q96BY6 2186 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 TRBV5-4A0A0C4DH59 114 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 FOXO6A8MYZ6 492 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 H7C0S8 307 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 UQCRHP07919 91 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 MARCKSL1P49006 195 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 CDKN1CP49918 316 aaPredicted RBP8.13□□□□□ -1.11
TROAP-208ENST00000548817 IST1P53990 364 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 RWDD2BP57060 319 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 CSNK1G2P78368 415 aa8.13□□□□□ -1.11
TROAP-208ENST00000548817 FOXD4Q12950 439 aaPredicted RBP8.13□□□□□ -1.11
TROAP-208ENST00000548817 POU6F1Q14863 301 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms