RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 CTNNA2P26232 953 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 RBL1P28749 1068 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 GCGRP47871 477 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 ITIH4Q14624 930 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 SF1Q15637 639 aaKnown RBP16.19■□□□□ 0.18
VPS29-204ENST00000548259 CNSTQ6PJW8 725 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 COX15Q7KZN9 410 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 NDUFAF7Q7L592 441 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 OR8K1Q8NGG5 319 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 DNAJC1Q96KC8 554 aaKnown RBP16.19■□□□□ 0.18
VPS29-204ENST00000548259 CCDC42Q96M95 316 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 TBL1YQ9BQ87 522 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 TSSK1BQ9BXA7 367 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 ZNF304Q9HCX3 659 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 C3orf18Q9UK00 162 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 PLAGL1Q9UM63 463 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 HIVEP1P15822 2718 aa16.19■□□□□ 0.18
VPS29-204ENST00000548259 ZGRF1Q86YA3 2104 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 TACC2O95359 2948 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 hCG_1818297A0A087WSY0 165 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 GOLGA6L19H0YKK7 550 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 APOC4-APOC2K7ER74 178 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 KCNN4O15554 427 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 BMP10O95393 424 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 APOC2P02655 101 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 SERPINA7P05543 415 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 PRR35P0CG20 571 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 PSMB4P28070 264 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 PKLRP30613 574 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 OR1D4P47884 311 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 CDKN1CP49918 316 aaPredicted RBP16.18■□□□□ 0.18
VPS29-204ENST00000548259 KLC1Q07866 573 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 Q0VFX4 171 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 IQCB1Q15051 598 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 LONRF1Q17RB8 773 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 TTC23LQ6PF05 361 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 FIGLAQ6QHK4 219 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 RIPOR1Q6ZS17 1223 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 CDKL3Q8IVW4 592 aaPredicted RBP16.18■□□□□ 0.18
VPS29-204ENST00000548259 TMEM151BQ8IW70 566 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 STT3BQ8TCJ2 826 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 CHTF18Q8WVB6 975 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 TAAR6Q96RI8 345 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 TRIM8Q9BZR9 551 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 ARNT2Q9HBZ2 717 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 NLE1Q9NVX2 485 aaPredicted RBP16.18■□□□□ 0.18
VPS29-204ENST00000548259 TEKT2Q9UIF3 430 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 SH3BGRL2Q9UJC5 107 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 SLC39A10Q9ULF5 831 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 HYOU1Q9Y4L1 999 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 PCM1Q15154 2024 aa16.18■□□□□ 0.18
VPS29-204ENST00000548259 CCL22O00626 93 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 PRPF4O43172 522 aaKnown RBP eCLIP16.17■□□□□ 0.18
VPS29-204ENST00000548259 TPM1P09493 284 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 ZGLP1P0C6A0 271 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 ICAM2P13598 275 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 CD9P21926 228 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 DBN1Q16643 649 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 ASTE1Q2TB18 679 aaPredicted RBP16.17■□□□□ 0.18
VPS29-204ENST00000548259 ANKRD20A2Q5SQ80 823 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 ANKRD20A1Q5TYW2 823 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 ANKRD20A3Q5VUR7 823 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 SPNS3Q6ZMD2 512 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 KATNAL2Q8IYT4 538 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 RAB42Q8N4Z0 105 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 BRIX1Q8TDN6 353 aaKnown RBP16.17■□□□□ 0.18
VPS29-204ENST00000548259 STYXQ8WUJ0 223 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.17■□□□□ 0.18
VPS29-204ENST00000548259 ZUFSPQ96AP4 578 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 RAB11FIP5Q9BXF6 653 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 ENAMQ9NRM1 1142 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 RIC8BQ9NVN3 520 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 PLA2G3Q9NZ20 509 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 CDC14AQ9UNH5 594 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 KLHL20Q9Y2M5 609 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 MAU2Q9Y6X3 613 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 CSMD2Q7Z408 3487 aa16.17■□□□□ 0.18
VPS29-204ENST00000548259 FER1L5A0AVI2 2057 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 SLC5A10A0PJK1 596 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 MACROD2A1Z1Q3 448 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 HYKKA2RU49 373 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 FITM1A5D6W6 292 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 TARM1B6A8C7 271 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 TPBGLP0DKB5 382 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 ERVK-10P10266 1014 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 PEBP1P30086 187 aaKnown RBP16.16■□□□□ 0.18
VPS29-204ENST00000548259 SOX11P35716 441 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 GRIA3P42263 894 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 OLIG2Q13516 323 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 TRIM14Q14142 442 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 NAA25Q14CX7 972 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 ABHD17BQ5VST6 288 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 ATG9BQ674R7 924 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 PACS1Q6VY07 963 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 BBS12Q6ZW61 710 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 DCUN1D3Q8IWE4 304 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 FAM20CQ8IXL6 584 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 PRSS58Q8IYP2 241 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 METTL27Q8N6F8 245 aaPredicted RBP16.16■□□□□ 0.18
VPS29-204ENST00000548259 SIRT6Q8N6T7 355 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms