RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 LRTM1Q9HBL6 345 aa13.06□□□□□ -0.32
PTCH1-215ENST00000547672 CCDC177Q9NQR7 707 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-215ENST00000547672 MBNL1Q9NR56 388 aaKnown RBP13.06□□□□□ -0.32
PTCH1-215ENST00000547672 WNT16Q9UBV4 365 aa13.06□□□□□ -0.32
PTCH1-215ENST00000547672 CROTQ9UKG9 612 aa13.06□□□□□ -0.32
PTCH1-215ENST00000547672 DUSP12Q9UNI6 340 aa13.06□□□□□ -0.32
PTCH1-215ENST00000547672 AP3M1Q9Y2T2 418 aa13.06□□□□□ -0.32
PTCH1-215ENST00000547672 COLEC10Q9Y6Z7 277 aa13.06□□□□□ -0.32
PTCH1-215ENST00000547672 A0A088AWK7 358 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 A0A1W2PP18 115 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 KANSL1LA0AUZ9 987 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 MRASO14807 208 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 LSM1O15116 133 aaKnown RBP13.05□□□□□ -0.32
PTCH1-215ENST00000547672 SLC31A1O15431 190 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 CFLARO15519 480 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 FOSL2P15408 326 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 NDUFV2P19404 249 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 IMPA1P29218 277 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 SERPINB1P30740 379 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 HNRNPH1P31943 449 aaKnown RBP13.05□□□□□ -0.32
PTCH1-215ENST00000547672 CLNS1AP54105 237 aaKnown RBP13.05□□□□□ -0.32
PTCH1-215ENST00000547672 NFE2L1Q14494 772 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.05□□□□□ -0.32
PTCH1-215ENST00000547672 C1orf146Q5VVC0 180 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 CAPRIN2Q6IMN6 1127 aaKnown RBP13.05□□□□□ -0.32
PTCH1-215ENST00000547672 GRHL2Q6ISB3 625 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 PGM2L1Q6PCE3 622 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 AAGABQ6PD74 315 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 MBOAT1Q6ZNC8 495 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 KRT78Q8N1N4 520 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 SFRP1Q8N474 314 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 OR5K2Q8NHB8 316 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 ERLEC1Q96DZ1 483 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 WDR34Q96EX3 536 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 MARK4Q96L34 752 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 WDR92Q96MX6 357 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 SGPP1Q9BX95 441 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 OSBPL6Q9BZF3 934 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 ZDHHC5Q9C0B5 715 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 USP36Q9P275 1121 aaKnown RBP13.05□□□□□ -0.32
PTCH1-215ENST00000547672 GULP1Q9UBP9 304 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 LEF1Q9UJU2 399 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-215ENST00000547672 NDRG2Q9UN36 371 aaKnown RBP13.05□□□□□ -0.32
PTCH1-215ENST00000547672 OR1A2Q9Y585 309 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 COL4A2P08572 1712 aa13.05□□□□□ -0.32
PTCH1-215ENST00000547672 C15orf38-AP3S2A0A0A6YYH1 394 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 A0A1B0GTL3 188 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 CCDC154A6NI56 674 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 PRAMEF26H0Y7S4 382 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 SEMA4FO95754 770 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 IL6P05231 212 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 CEACAM5P06731 702 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 ASGR2P07307 311 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 ALDOCP09972 364 aaKnown RBP13.04□□□□□ -0.32
PTCH1-215ENST00000547672 C1GALT1C1LP0DN25 315 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 GABRG2P18507 467 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 ME2P23368 584 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 ITPKAP23677 461 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 POLR2JP52435 117 aaKnown RBP13.04□□□□□ -0.32
PTCH1-215ENST00000547672 THOP1P52888 689 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 MTTPP55157 894 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 E2F2Q14209 437 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 FGL2Q14314 439 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 NFATC4Q14934 902 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 CCDC6Q16204 474 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 CYP2A13Q16696 494 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 PYCR3Q53H96 274 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 SAMD4BQ5PRF9 694 aaKnown RBP13.04□□□□□ -0.32
PTCH1-215ENST00000547672 THEMIS2Q5TEJ8 643 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 IL23RQ5VWK5 629 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 ATG9BQ674R7 924 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 MED27Q6P2C8 311 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 LCTLQ6UWM7 567 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 TMEM92Q6UXU6 159 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 WASH2PQ6VEQ5 465 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 CHST15Q7LFX5 561 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-215ENST00000547672 ARPINQ7Z6K5 226 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 FAM124AQ86V42 546 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 DCP2Q8IU60 420 aaKnown RBP13.04□□□□□ -0.32
PTCH1-215ENST00000547672 RGL4Q8IZJ4 473 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 GJD3Q8N144 294 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 ZNF480Q8WV37 535 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 SMPDL3AQ92484 453 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 KLK6Q92876 244 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 PYCR2Q96C36 320 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 SPDL1Q96EA4 605 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 CDX2Q99626 313 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-215ENST00000547672 LGR4Q9BXB1 951 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 PCED1AQ9H1Q7 454 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 DENND2DQ9H6A0 471 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-215ENST00000547672 LMAN1LQ9HAT1 526 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 WASH6PQ9NQA3 447 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 INTS7Q9NVH2 962 aaKnown RBP13.04□□□□□ -0.32
PTCH1-215ENST00000547672 TSC22D4Q9Y3Q8 395 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 GPSM3Q9Y4H4 160 aa13.04□□□□□ -0.32
PTCH1-215ENST00000547672 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.04□□□□□ -0.32
PTCH1-215ENST00000547672 KCNE1BA0A087WTH5 132 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 ANTXRLA6NF34 631 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 FOXE1O00358 373 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-215ENST00000547672 NR5A2O00482 541 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms