RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 OR1A2Q9Y585 309 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 ACSM2AQ08AH3 577 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 ZNF234Q14588 700 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 CYP27C1Q4G0S4 372 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 C1orf53Q5VUE5 145 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 LYPLAL1Q5VWZ2 237 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 ACSM2BQ68CK6 577 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 DUS1LQ6P1R4 473 aaKnown RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 PSRC1Q6PGN9 363 aaPredicted RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 YAF2Q8IY57 180 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 ARRDC3Q96B67 414 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 PDLIM5Q96HC4 596 aaKnown RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 FOPNLQ96NB1 174 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 PCDHA9Q9Y5H5 950 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 CABIN1Q9Y6J0 2220 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 MAGEB17A8MXT2 336 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 ATG13O75143 517 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 MATN4O95460 622 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 FAM58BPP0C7Q3 252 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 C6P13671 934 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 COX7A2P14406 83 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 TIE1P35590 1138 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 DOC2AQ14183 400 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 HKDC1Q2TB90 917 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 FRG2Q64ET8 278 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 OGFOD2Q6N063 350 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 ZCCHC8Q6NZY4 707 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 METTL3Q86U44 580 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 NPAS3Q8IXF0 933 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 MINDY1Q8N5J2 469 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 BTN2A2Q8WVV5 523 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 JPH3Q8WXH2 748 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 HIC2Q96JB3 615 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 LMLNQ96KR4 655 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 FRG2BQ96QU4 278 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 PANX1Q96RD7 426 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 MCCC1Q96RQ3 725 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 CCT7Q99832 543 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 GPATCH1Q9BRR8 931 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SORBS1Q9BX66 1292 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 FZD3Q9NPG1 666 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SPASTQ9UBP0 616 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SCN2AQ99250 2005 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SEC16AO15027 2179 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 ZNF197O14709 1029 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 LINC01565O15544 149 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 ZNF26P17031 533 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 PTGER1P34995 402 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 ZFP36L2P47974 494 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 PHC1P78364 1004 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 MYBPC1Q00872 1141 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 C1orf52Q8N6N3 182 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 OR4K1Q8NGD4 311 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 ITCHQ96J02 903 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SAMD11Q96NU1 681 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 NR1H4Q96RI1 486 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 CPEB1Q9BZB8 566 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 LIN28AQ9H9Z2 209 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SNX6Q9UNH7 406 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 PLXNA4Q9HCM2 1894 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SCN8AQ9UQD0 1980 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 TCRBV3S1A0A5B6 114 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 RFXANKO14593 260 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SLC9A3R1O14745 358 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 EEDO75530 441 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 POP7O75817 140 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 PRKD3O94806 890 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 FKBP9O95302 570 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SNAP29O95721 258 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 LDLRP01130 860 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 CATP04040 527 aaKnown RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 IRX1P78414 480 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 SPESP1Q6UW49 350 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 DLEU7Q6UYE1 221 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 FKBP9P1Q75LS8 142 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 CBARPQ8N350 705 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 PBX4Q9BYU1 374 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 ACTR3BQ9P1U1 418 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 PCDHB14Q9Y5E9 798 aa12.36□□□□□ -0.43
SCAF11-209ENST00000547018 PCYT1BQ9Y5K3 369 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-209ENST00000547018 IGLON5A6NGN9 336 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SLC28A1O00337 649 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 FTH1P02794 183 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 EBLN1P0CF75 366 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 IL12RB1P42701 662 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 ATP4BP51164 291 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 CHRNB3Q05901 458 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SHHQ15465 462 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 TBPL2Q6SJ96 375 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 UGT2A3Q6UWM9 527 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 LSRQ86X29 649 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 ADGRG5Q8IZF4 528 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 OR8D1Q8WZ84 308 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 ISG20Q96AZ6 181 aaKnown RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 PKP4Q99569 1192 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SLC12A9Q9BXP2 914 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SMURF2Q9HAU4 748 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 ZIM2Q9NZV7 527 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms