RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 MCATQ8IVS2 390 aaKnown RBP12.03□□□□□ -0.48
COPS7A-221ENST00000546229 DCUN1D3Q8IWE4 304 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 ACRBPQ8NEB7 543 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 OR11G2Q8NGC1 345 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 OR2L8Q8NGY9 312 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 ATG4AQ8WYN0 398 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 DLG3Q92796 817 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 HDAC10Q969S8 669 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 CALR3Q96L12 384 aaKnown RBP12.03□□□□□ -0.48
COPS7A-221ENST00000546229 C5orf34Q96MH7 638 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 PANX2Q96RD6 677 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 NDC1Q9BTX1 674 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 P2RY12Q9H244 342 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 ATP13A2Q9NQ11 1180 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 TXLNGQ9NUQ3 528 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 MAP10Q9P2G4 905 aa12.03□□□□□ -0.48
COPS7A-221ENST00000546229 ZGRF1Q86YA3 2104 aa12.02□□□□□ -0.48
COPS7A-221ENST00000546229 IGLV3-12A0A075B6K2 115 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 A0A1W2PPV9 198 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 RASGRF2O14827 1237 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 S1PR4O95977 384 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 OR56A5P0C7T3 313 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 PRF1P14222 555 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 PSMB5P28074 263 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 TDGF1P3P51864 188 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 EFNA3P52797 238 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 CDH17Q12864 832 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 GBX1Q14549 363 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 SPA17Q15506 151 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 CCSMST1Q4G0I0 132 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 SYTL3Q4VX76 610 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 B3GNTL1Q67FW5 361 aaPredicted RBP12.02□□□□□ -0.49
COPS7A-221ENST00000546229 FRMPD2BQ6IN97 320 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 ZNF449Q6P9G9 518 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 RNF44Q7L0R7 432 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 ZADH2Q8N4Q0 377 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 ARHGEF39Q8N4T4 335 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 TAB3Q8N5C8 712 aaPredicted RBP12.02□□□□□ -0.49
COPS7A-221ENST00000546229 HMGCLL1Q8TB92 370 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 GRHL3Q8TE85 626 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 PSMF1Q92530 271 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 TM9SF4Q92544 642 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 N4BP2L2Q92802 583 aaPredicted RBP12.02□□□□□ -0.49
COPS7A-221ENST00000546229 C10orf90Q96M02 699 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 CARD6Q9BX69 1037 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 MRM3Q9HC36 420 aaKnown RBP12.02□□□□□ -0.49
COPS7A-221ENST00000546229 CUTCQ9NTM9 273 aa12.02□□□□□ -0.49
COPS7A-221ENST00000546229 SVILO95425 2214 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 ERI2A8K979 691 aaKnown RBP12.01□□□□□ -0.49
COPS7A-221ENST00000546229 KLHL41O60662 606 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 ERGP11308 486 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 ITGA3P26006 1051 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 ARNTP27540 789 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 SOX11P35716 441 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 GRIA3P42263 894 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 ARSFP54793 590 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 CSE1LP55060 971 aaKnown RBP12.01□□□□□ -0.49
COPS7A-221ENST00000546229 YBX1P67809 324 aaKnown RBP12.01□□□□□ -0.49
COPS7A-221ENST00000546229 YOD1Q5VVQ6 348 aaPredicted RBP12.01□□□□□ -0.49
COPS7A-221ENST00000546229 FIGLAQ6QHK4 219 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 SHISA6Q6ZSJ9 500 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 LDB1Q86U70 411 aaPredicted RBP12.01□□□□□ -0.49
COPS7A-221ENST00000546229 TAX1BP1Q86VP1 789 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 HOOK3Q86VS8 718 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 KRT222Q8N1A0 295 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 C2orf73Q8N5S3 287 aaPredicted RBP12.01□□□□□ -0.49
COPS7A-221ENST00000546229 TTC13Q8NBP0 860 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 PEX13Q92968 403 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 HES6Q96HZ4 224 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 SOX17Q9H6I2 414 aaPredicted RBP12.01□□□□□ -0.49
COPS7A-221ENST00000546229 ETNK1Q9HBU6 452 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 CDC23Q9UJX2 597 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 TCAF1Q9Y4C2 921 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 NFS1Q9Y697 457 aa12.01□□□□□ -0.49
COPS7A-221ENST00000546229 HEATR9A2RTY3 570 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 OR2A25A4D2G3 310 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 LIASO43766 372 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 KLHL18O94889 574 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 FKBP9O95302 570 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 C1orf105O95561 183 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 FTCDO95954 541 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 STSP08842 583 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 EDN3P14138 238 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 PTMSP20962 102 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 OR1D4P47884 311 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 GLRBP48167 497 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 SNRPNP63162 240 aaKnown RBP12□□□□□ -0.49
COPS7A-221ENST00000546229 HSPA14Q0VDF9 509 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 ZNF169Q14929 603 aaPredicted RBP12□□□□□ -0.49
COPS7A-221ENST00000546229 TUBB8Q3ZCM7 444 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 CTSL3PQ5NE16 218 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 ATG9BQ674R7 924 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 PRUNE1Q86TP1 453 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 LINC00523Q86TU6 105 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 METTL27Q8N6F8 245 aaPredicted RBP12□□□□□ -0.49
COPS7A-221ENST00000546229 OR2A1Q8NGT9 310 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 OR4L1Q8NH43 312 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 FAR1Q8WVX9 515 aa12□□□□□ -0.49
COPS7A-221ENST00000546229 LHPPQ9H008 270 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms