RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 RPLP0P05388 317 aaKnown RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 FABP3P05413 133 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 PSEN2P49810 448 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 CSNK2BP67870 215 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 ELP6Q0PNE2 266 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 EFEMP1Q12805 493 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 SGO1Q5FBB7 561 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 LRIF1Q5T3J3 769 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 ZNF544Q6NX49 715 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 SUSD1Q6UWL2 747 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 SPATC1Q76KD6 591 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 CCDC71Q8IV32 467 aaPredicted RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 IL17RDQ8NFM7 739 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 DNASE1L2Q92874 299 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 TP53INP1Q96A56 240 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 CDADC1Q9BWV3 514 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 FARSBQ9NSD9 589 aaKnown RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 DDX28Q9NUL7 540 aaKnown RBP13.86□□□□□ -0.19
SRP54-202ENST00000546080 NPAP1Q9NZP6 1156 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 FKBPLQ9UIM3 349 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 PCDHGB6Q9Y5F9 930 aa13.86□□□□□ -0.19
SRP54-202ENST00000546080 LOC100506127A0A0U1RQW1 187 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 KMOO15229 486 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 ZW10O43264 779 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 MFN2O95140 757 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 GUCA1CO95843 209 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 CLCN4P51793 760 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 YBEYP58557 167 aaPredicted RBP13.85□□□□□ -0.19
SRP54-202ENST00000546080 RPP38P78345 283 aaKnown RBP13.85□□□□□ -0.19
SRP54-202ENST00000546080 NPRL3Q12980 569 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 CAMK2BQ13554 666 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 TBCEQ15813 527 aaPredicted RBP13.85□□□□□ -0.19
SRP54-202ENST00000546080 TMC5Q6UXY8 1006 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 ENTHD1Q8IYW4 607 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 APH1BQ8WW43 257 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 SLC10A4Q96EP9 437 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 PITX2Q99697 317 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 CEP44Q9C0F1 390 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 NUAK2Q9H093 628 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 PRDM8Q9NQV8 689 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 TRMT13Q9NUP7 481 aaKnown RBP13.85□□□□□ -0.19
SRP54-202ENST00000546080 ZNF490Q9ULM2 529 aaPredicted RBP13.85□□□□□ -0.19
SRP54-202ENST00000546080 PEX16Q9Y5Y5 336 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 DOCK4Q8N1I0 1966 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 PNMA8CA0A1B0GUJ8 204 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 MOXD2PA6NHM9 499 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 HOXC11O43248 304 aaPredicted RBP13.85□□□□□ -0.19
SRP54-202ENST00000546080 ULK1O75385 1050 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 LPOP22079 712 aaPredicted RBP13.85□□□□□ -0.19
SRP54-202ENST00000546080 S100A3P33764 101 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 OR2B6P58173 313 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 ATAD3CQ5T2N8 411 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 SBSNQ6UWP8 590 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 SLC46A3Q7Z3Q1 461 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 MON1AQ86VX9 555 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 ANKRD46Q86W74 232 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 CEP295NLQ96MC4 621 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 INPP5KQ9BT40 448 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 ZBED2Q9BTP6 218 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
SRP54-202ENST00000546080 MARCH7Q9H992 704 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 ASIC5Q9NY37 505 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 EHD3Q9NZN3 535 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 MKLN1Q9UL63 735 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 WBP11Q9Y2W2 641 aaKnown RBP13.85□□□□□ -0.19
SRP54-202ENST00000546080 N6AMT1Q9Y5N5 214 aa13.85□□□□□ -0.19
SRP54-202ENST00000546080 TBKBP1A7MCY6 615 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 ESR1P03372 595 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 CXCR2P25025 360 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 CLCN7P51798 805 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 MRPS15P82914 257 aaKnown RBP13.84□□□□□ -0.19
SRP54-202ENST00000546080 CAMK2GQ13555 558 aaPredicted RBP13.84□□□□□ -0.19
SRP54-202ENST00000546080 USP39Q53GS9 565 aaKnown RBP13.84□□□□□ -0.19
SRP54-202ENST00000546080 SPANXN2Q5MJ10 180 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 FAM171A1Q5VUB5 890 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 SDHAF4Q5VUM1 108 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 DOK6Q6PKX4 331 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 RGL4Q8IZJ4 473 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 NLGN4XQ8N0W4 816 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 OR6F1Q8NGZ6 308 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 MYDGFQ969H8 173 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 SMIM14Q96QK8 99 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 CDK5RAP1Q96SZ6 601 aaKnown RBP13.84□□□□□ -0.19
SRP54-202ENST00000546080 SGIP1Q9BQI5 828 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 MGME1Q9BQP7 344 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 REEP1Q9H902 201 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 PDFQ9HBH1 243 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 BPIFA1Q9NP55 256 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 SERHLQ9NQF3 203 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 FBXL12Q9NXK8 326 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 TBC1D14Q9P2M4 693 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 AGO1Q9UL18 857 aaKnown RBP13.84□□□□□ -0.19
SRP54-202ENST00000546080 MAN2B2Q9Y2E5 1009 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 ACTL7AQ9Y615 435 aa13.84□□□□□ -0.19
SRP54-202ENST00000546080 C17orf102A2RUQ5 167 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 HMBSP08397 361 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 BCKDHAP12694 445 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 C21orf33P30042 268 aaPredicted RBP13.83□□□□□ -0.19
SRP54-202ENST00000546080 ARPC4P59998 168 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 RPS14P62263 151 aaKnown RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms