RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 GNA12Q03113 381 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 CD47Q08722 323 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ELAVL2Q12926 359 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 KCNAB2Q13303 367 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 GTF2H2Q13888 395 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 BCL2A1Q16548 175 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 CTF1Q16619 201 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF181Q2M3W8 571 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 AP5B1Q2VPB7 878 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 SETMARQ53H47 684 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 INO80DQ53TQ3 878 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 OTUD3Q5T2D3 398 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 GTF2H2CQ6P1K8 395 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 IL27RAQ6UWB1 636 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 SLC16A12Q6ZSM3 486 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 RPS27LQ71UM5 84 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PIWIL3Q7Z3Z3 882 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 MILR1Q7Z6M3 343 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 SERPINA11Q86U17 422 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PDZD3Q86UT5 571 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 LRRTM3Q86VH5 581 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 P2RY8Q86VZ1 359 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 DCP2Q8IU60 420 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 RBFAQ8N0V3 343 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PGBD5Q8N414 524 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 CPA6Q8N4T0 437 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 KIAA1958Q8N8K9 716 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 C19orf47Q8N9M1 422 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 NPLOC4Q8TAT6 608 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 SLC22A17Q8WUG5 538 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 CHTF18Q8WVB6 975 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 SNRNP27Q8WVK2 155 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 EXT2Q93063 718 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 FAM162AQ96A26 154 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 TAMM41Q96BW9 452 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 LINGO1Q96FE5 620 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ABHD8Q96I13 439 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PYURFQ96I23 114 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ALPK1Q96QP1 1244 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 FERD3LQ96RJ6 166 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 MBOAT4Q96T53 435 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PITX2Q99697 317 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 FAM126AQ9BYI3 521 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ASPSCR1Q9BZE9 553 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 RACGAP1Q9H0H5 632 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 P2RY12Q9H244 342 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 MMP27Q9H306 513 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 CWH43Q9H720 699 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 KAT8Q9H7Z6 458 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 SIAEQ9HAT2 523 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 NMUR1Q9HB89 426 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PLCXD1Q9NUJ7 323 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 INTS7Q9NVH2 962 aaKnown RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 TMLHEQ9NVH6 421 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 C1orf109Q9NX04 203 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 MIOSQ9NXC5 875 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ACTR10Q9NZ32 417 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 NPAP1Q9NZP6 1156 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 FRRS1LQ9P0K9 344 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 HECAQ9UBI9 543 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 DAPK2Q9UIK4 370 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF225Q9UK10 706 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 INVSQ9Y283 1065 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PKP3Q9Y446 797 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 CCL27Q9Y4X3 112 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 PCDHGA8Q9Y5G5 932 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 TIMM13Q9Y5L4 95 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-225ENST00000545920 ARL5AQ9Y689 179 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 TANC1Q9C0D5 1861 aa6.32□□□□□ -1.4
SNHG1-225ENST00000545920 MCM3APO60318 1980 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 PNMA8CA0A1B0GUJ8 204 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 OR51F1A6NGY5 319 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 EVPLLA8MZ36 301 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 E9PQ18 207 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 H7C4K7 107 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CDC7O00311 574 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 MAGEB3O15480 346 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 FFAR2O15552 330 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 OIP5O43482 229 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 RGS10O43665 173 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ULK1O75385 1050 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CREG1O75629 220 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 OR4F21O95013 312 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ZBTB7AO95365 584 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ANGPTL1O95841 491 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 GSNP06396 782 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 PGRP06401 933 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CAPN1P07384 714 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 G6PDP11413 515 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 NCF1P14598 390 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 NCK1P16333 377 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 PTPN2P17706 415 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 TSPAN8P19075 237 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 POLR2EP19388 210 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 IGFBP5P24593 272 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 HOXD9P28356 352 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 POLR2IP36954 125 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 HALP42357 657 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CSNK1DP48730 415 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms