RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CFAP206Q8IYR0 622 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 CEP57L1Q8IYX8 460 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 KIRREL3Q8IZU9 778 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 OR5M8Q8NGP6 311 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 IRGQQ8WZA9 623 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 KRT12Q99456 494 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 FNDC11Q9BVV2 318 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 DGCR6LQ9BY27 220 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 PITPNM3Q9BZ71 974 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 UPF3AQ9H1J1 476 aaKnown RBP3.96□□□□□ -1.78
SNHG1-224ENST00000545688 CFDP1Q9UEE9 299 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-224ENST00000545688 TUBE1Q9UJT0 475 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 MOB4Q9Y3A3 225 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 TMEM2Q9UHN6 1383 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 NKTRP30414 1462 aaKnown RBP3.96□□□□□ -1.78
SNHG1-224ENST00000545688 CCDC18Q5T9S5 1454 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 ADGBQ8N7X0 1667 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 ARHGAP31Q2M1Z3 1444 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 DIP2AQ14689 1571 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 IGKV6D-41A0A0C4DH26 115 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 CCDC189A1A4V9 331 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 IGHV4-31P0DP07 118 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 SLC6A6P31641 620 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 MMP12P39900 470 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 MFAP4P55083 255 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 TPD52P55327 224 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-224ENST00000545688 PHLDA2Q53GA4 152 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 TAF1BQ53T94 588 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-224ENST00000545688 ZNF774Q6NX45 483 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 FIGLAQ6QHK4 219 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 LDB1Q86U70 411 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-224ENST00000545688 COMMD2Q86X83 199 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 TMEM139Q8IV31 216 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 TTC39CQ8N584 583 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 NIPA2Q8N8Q9 360 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 PAPD5Q8NDF8 572 aaKnown RBP3.95□□□□□ -1.78
SNHG1-224ENST00000545688 MOSPD2Q8NHP6 518 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 USP28Q96RU2 1077 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 BTBD10Q9BSF8 475 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 LMF2Q9BU23 707 aaKnown RBP3.95□□□□□ -1.78
SNHG1-224ENST00000545688 LRRC61Q9BV99 259 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 NUP85Q9BW27 656 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 KCNK15Q9H427 330 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 EIF2B3Q9NR50 452 aaKnown RBP3.95□□□□□ -1.78
SNHG1-224ENST00000545688 FGF21Q9NSA1 209 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 CACNG4Q9UBN1 327 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 PLAGL1Q9UM63 463 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 PPP1R3CQ9UQK1 317 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 AHDC1Q5TGY3 1603 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-224ENST00000545688 SETD5Q9C0A6 1442 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 AFF2P51816 1311 aa3.95□□□□□ -1.78
SNHG1-224ENST00000545688 TIAM1Q13009 1591 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 NWD1Q149M9 1564 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 KPNA7A9QM74 516 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 RNASEH1O60930 286 aaKnown RBP3.94□□□□□ -1.78
SNHG1-224ENST00000545688 WDPCPO95876 746 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 GABRA5P31644 462 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 LEPRP48357 1165 aaKnown RBP3.94□□□□□ -1.78
SNHG1-224ENST00000545688 PAX9P55771 341 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 DCAF7P61962 342 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 SQLEQ14534 574 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 ITPRIPL2Q3MIP1 535 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 WLSQ5T9L3 541 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 TMCO3Q6UWJ1 677 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 CDC20BQ86Y33 519 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 PHLDA1Q8WV24 401 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-224ENST00000545688 CENPTQ96BT3 561 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 FOXN4Q96NZ1 517 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 GPATCH1Q9BRR8 931 aaKnown RBP3.94□□□□□ -1.78
SNHG1-224ENST00000545688 SPATC1LQ9H0A9 340 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 PANK4Q9NVE7 773 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 SEC63Q9UGP8 760 aaKnown RBP3.94□□□□□ -1.78
SNHG1-224ENST00000545688 GRID1Q9ULK0 1009 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 UBR1Q8IWV7 1749 aa3.94□□□□□ -1.78
SNHG1-224ENST00000545688 MSH6P52701 1360 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 MROH1Q8NDA8 1641 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 ANKRD61A6NGH8 418 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 F5H0A9 414 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-224ENST00000545688 SOCS3O14543 225 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 PAPSS1O43252 624 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-224ENST00000545688 OR10H2O60403 315 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 ZWINTO95229 277 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 VPREB1P12018 145 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 HERV-K104P61576 105 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 CDK3Q00526 305 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 RAPSNQ13702 412 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 HSP90AB4PQ58FF6 505 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 XKR3Q5GH77 459 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 SLC25A53Q5H9E4 307 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 CCDC70Q6NSX1 233 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 ZNF343Q6P1L6 599 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 GPRIN3Q6ZVF9 776 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 ARHGAP24Q8N264 748 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 PRSS33Q8NF86 280 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 ZNF519Q8TB69 540 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 SMAP2Q8WU79 429 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-224ENST00000545688 ARHGAP45Q92619 1136 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 SLCO2A1Q92959 643 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 SAT2Q96F10 170 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms