RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 CSF2RBP32927 897 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 TRHRP34981 398 aaPredicted RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 CA5AP35218 305 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 GDNFP39905 211 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 CETN2P41208 172 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 AGFG1P52594 562 aaKnown RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 RRADP55042 308 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 ERVFRD-1P60508 538 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 YPEL5P62699 121 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 RPS21P63220 83 aaKnown RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 ECT2LQ008S8 904 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 DMPKQ09013 629 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 CCDC15Q0P6D6 951 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 MYBPHQ13203 477 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 TAF5Q15542 800 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 ZKSCAN8Q15776 578 aaPredicted RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 C3orf36Q3SXR2 165 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 INO80DQ53TQ3 878 aaPredicted RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 FSCBQ5H9T9 825 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 B3GNTL1Q67FW5 361 aaPredicted RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 RAP1GAP2Q684P5 730 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 DARS2Q6PI48 645 aaKnown RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 NPNTQ6UXI9 565 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 MACC1Q6ZN28 852 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 DAAM2Q86T65 1068 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 SRLQ86TD4 932 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 MAP7D3Q8IWC1 876 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 CCAR2Q8N163 923 aaKnown RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 OTUD6BQ8N6M0 293 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 ARFGAP1Q8N6T3 406 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 EMC1Q8N766 993 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 UBL4BQ8N7F7 174 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 DNAAF3Q8N9W5 541 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 FAM46DQ8NEK8 389 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 JOSD2Q8TAC2 188 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 CA5BP1Q8WTZ4 195 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 FAM172AQ8WUF8 416 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 NRG4Q8WWG1 115 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 OR8D1Q8WZ84 308 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 FATE1Q969F0 183 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 CFAP57Q96MR6 1250 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 RUFY1Q96T51 708 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 WDR77Q9BQA1 342 aaPredicted RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 WDCPQ9H6R7 721 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 ZNF552Q9H707 407 aaPredicted RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 ARHGEF38Q9NXL2 777 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 IL17CQ9P0M4 197 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 XPO7Q9UIA9 1087 aaKnown RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 SCOCQ9UIL1 159 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 GUCA1BQ9UMX6 200 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.55□□□□□ -1.363e-16■■■□□ 17.6
LDHA-223ENST00000545215 ANK3Q12955 4377 aaKnown RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 CNTRLQ7Z7A1 2325 aa6.55□□□□□ -1.36
LDHA-223ENST00000545215 HRNRQ86YZ3 2850 aaPredicted RBP6.55□□□□□ -1.36
LDHA-223ENST00000545215 SYNJ2BP-COX16A0A087WUM0 186 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 IGHV1OR21-1A0A087WYE8 117 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 CCDC189A1A4V9 331 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 MACROD2A1Z1Q3 448 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 RHPN2P1A8MT19 583 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 KCNU1A8MYU2 1149 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 ZNF487B1APH4 448 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 MCF2LO15068 1137 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 PSTPIP1O43586 416 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 KLHL41O60662 606 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 IPO13O94829 963 aaKnown RBP6.54□□□□□ -1.36
LDHA-223ENST00000545215 KIAA0754O94854 1291 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 HTR1BP28222 390 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 NNMTP40261 264 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 NUMBP49757 651 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 STK19P49842 368 aaPredicted RBP6.54□□□□□ -1.36
LDHA-223ENST00000545215 CASP6P55212 293 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 PITX1P78337 314 aaPredicted RBP6.54□□□□□ -1.36
LDHA-223ENST00000545215 CDC16Q13042 620 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 NME3Q13232 169 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 KEAP1Q14145 624 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 MESDQ14696 234 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 PDK2Q15119 407 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 ODF2Q5BJF6 829 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 RABGAP1LQ5R372 815 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 UBAP2Q5T6F2 1119 aaKnown RBP6.54□□□□□ -1.36
LDHA-223ENST00000545215 ERMARDQ5T6L9 678 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 KIAA1161Q6NSJ0 714 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 LRRC31Q6UY01 552 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 ZNF771Q7L3S4 317 aaPredicted RBP6.54□□□□□ -1.36
LDHA-223ENST00000545215 PEX26Q7Z412 305 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 SLFN11Q7Z7L1 901 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 PHLDB2Q86SQ0 1253 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 C17orf82Q86X59 251 aaPredicted RBP6.54□□□□□ -1.36
LDHA-223ENST00000545215 CIR1Q86X95 450 aaPredicted RBP6.54□□□□□ -1.36
LDHA-223ENST00000545215 APCDD1Q8J025 514 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 CALML6Q8TD86 181 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 RNF31Q96EP0 1072 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 RPL10LQ96L21 214 aaKnown RBP6.54□□□□□ -1.36
LDHA-223ENST00000545215 RBM15Q96T37 977 aaKnown RBP eCLIP6.54□□□□□ -1.364e-13■■■□□ 17.4
LDHA-223ENST00000545215 TKTL2Q9H0I9 626 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 PPCSQ9HAB8 311 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 ZBTB20Q9HC78 741 aaPredicted RBP6.54□□□□□ -1.36
LDHA-223ENST00000545215 LZTFL1Q9NQ48 299 aa6.54□□□□□ -1.36
LDHA-223ENST00000545215 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.54□□□□□ -1.36
LDHA-223ENST00000545215 PIGVQ9NUD9 493 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms