RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 TMEM151BQ8IW70 566 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 C2orf73Q8N5S3 287 aaPredicted RBP13.55□□□□□ -0.24
DDX11-228ENST00000545115 TTC29Q8NA56 475 aaPredicted RBP13.55□□□□□ -0.24
DDX11-228ENST00000545115 PPHLN1Q8NEY8 458 aaKnown RBP13.55□□□□□ -0.24
DDX11-228ENST00000545115 INPP5DQ92835 1189 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 PANX3Q96QZ0 392 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 SPSB2Q99619 263 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 DESI2Q9BSY9 194 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 SLC26A1Q9H2B4 701 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 MRM3Q9HC36 420 aaKnown RBP13.55□□□□□ -0.24
DDX11-228ENST00000545115 SLC6A20Q9NP91 592 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 RAB6BQ9NRW1 208 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 CUTCQ9NTM9 273 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 CATSPERZQ9NTU4 200 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 ERRFI1Q9UJM3 462 aaPredicted RBP13.55□□□□□ -0.24
DDX11-228ENST00000545115 CDC23Q9UJX2 597 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 FBXL4Q9UKA2 621 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 SLC39A10Q9ULF5 831 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 ZNF148Q9UQR1 794 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 PCM1Q15154 2024 aa13.55□□□□□ -0.24
DDX11-228ENST00000545115 HIVEP3Q5T1R4 2406 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 ANKUB1A6NFN9 424 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 APRTP07741 180 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 GRIA3P42263 894 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 TTPAP49638 278 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 ELOAQ14241 798 aaKnown RBP13.54□□□□□ -0.24
DDX11-228ENST00000545115 NKG7Q16617 165 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 CRB2Q5IJ48 1285 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 IRAK1BP1Q5VVH5 260 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 PRAMEF13Q5VWM6 474 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 FCRL6Q6DN72 434 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 PTRHD1Q6GMV3 140 aaKnown RBP13.54□□□□□ -0.24
DDX11-228ENST00000545115 TTC23LQ6PF05 361 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 FIGLAQ6QHK4 219 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 COX15Q7KZN9 410 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 LDB1Q86U70 411 aaPredicted RBP13.54□□□□□ -0.24
DDX11-228ENST00000545115 KRT222Q8N1A0 295 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 RAB42Q8N4Z0 105 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 CCDC89Q8N998 374 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 LMNTD1Q8N9Z9 388 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 GSDMBQ8TAX9 411 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 PPP4R1Q8TF05 950 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 RAD51AP1Q96B01 352 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 ZNF285Q96NJ3 590 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 WDR77Q9BQA1 342 aaPredicted RBP13.54□□□□□ -0.24
DDX11-228ENST00000545115 SELENOSQ9BQE4 189 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 ZBTB20Q9HC78 741 aaPredicted RBP13.54□□□□□ -0.24
DDX11-228ENST00000545115 ENAMQ9NRM1 1142 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 PAK5Q9P286 719 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 GNPTGQ9UJJ9 305 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 NXT1Q9UKK6 140 aaKnown RBP13.54□□□□□ -0.24
DDX11-228ENST00000545115 PCDHGA10Q9Y5H3 936 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 MRFAP1Q9Y605 127 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 COPG1Q9Y678 874 aaKnown RBP13.54□□□□□ -0.24
DDX11-228ENST00000545115 CCDC88CQ9P219 2028 aa13.54□□□□□ -0.24
DDX11-228ENST00000545115 WIPF3A6NGB9 483 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 SOCS6O14544 535 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 KPNA5O15131 536 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 LDLRP01130 860 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 MCM3P25205 808 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 GLRBP48167 497 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 FAM214AQ32MH5 1076 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 PCID2Q5JVF3 399 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 MAMDC2Q7Z304 686 aaPredicted RBP13.53□□□□□ -0.24
DDX11-228ENST00000545115 PRUNE1Q86TP1 453 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 CUZD1Q86UP6 607 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 SLC13A5Q86YT5 568 aaPredicted RBP13.53□□□□□ -0.24
DDX11-228ENST00000545115 MPP5Q8N3R9 675 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 RNF10Q8N5U6 811 aaKnown RBP13.53□□□□□ -0.24
DDX11-228ENST00000545115 UBE2Q2Q8WVN8 375 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 C1orf54Q8WWF1 131 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 ZUFSPQ96AP4 578 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 VPS50Q96JG6 964 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 C5orf34Q96MH7 638 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 BARD1Q99728 777 aaKnown RBP13.53□□□□□ -0.24
DDX11-228ENST00000545115 RBSNQ9H1K0 784 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 CHRAC1Q9NRG0 131 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 AGPAT4Q9NRZ5 378 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 IL1RAPL1Q9NZN1 696 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 MARCH4Q9P2E8 410 aaPredicted RBP13.53□□□□□ -0.24
DDX11-228ENST00000545115 SLC5A6Q9Y289 635 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 HS3ST3B1Q9Y662 390 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 NOTCH2Q04721 2471 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 NUP210LQ5VU65 1888 aa13.53□□□□□ -0.24
DDX11-228ENST00000545115 ANKRD12Q6UB98 2062 aa13.52□□□□□ -0.24
DDX11-228ENST00000545115 UNC79Q9P2D8 2635 aa13.52□□□□□ -0.24
DDX11-228ENST00000545115 FITM1A5D6W6 292 aa13.52□□□□□ -0.25
DDX11-228ENST00000545115 TARM1B6A8C7 271 aa13.52□□□□□ -0.25
DDX11-228ENST00000545115 CD3EAPO15446 510 aaKnown RBP13.52□□□□□ -0.25
DDX11-228ENST00000545115 PRICKLE3O43900 615 aaPredicted RBP13.52□□□□□ -0.25
DDX11-228ENST00000545115 SRPX2O60687 465 aaPredicted RBP13.52□□□□□ -0.25
DDX11-228ENST00000545115 ALOX12BO75342 701 aa13.52□□□□□ -0.25
DDX11-228ENST00000545115 C1orf105O95561 183 aa13.52□□□□□ -0.25
DDX11-228ENST00000545115 ETS1P14921 441 aa13.52□□□□□ -0.25
DDX11-228ENST00000545115 RPS3P23396 243 aaKnown RBP eCLIP13.52□□□□□ -0.25
DDX11-228ENST00000545115 SNX1Q13596 522 aa13.52□□□□□ -0.25
DDX11-228ENST00000545115 TUBB8Q3ZCM7 444 aa13.52□□□□□ -0.25
DDX11-228ENST00000545115 AGAP7PQ5VUJ5 663 aa13.52□□□□□ -0.25
DDX11-228ENST00000545115 KIRREL2Q6UWL6 708 aa13.52□□□□□ -0.25
DDX11-228ENST00000545115 OTOAQ7RTW8 1153 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms