RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 A0A1W2PQ72 361 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 FITM1A5D6W6 292 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 C2orf81A6NN90 581 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 CFAP99D6REC4 459 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 FAM227AF5H4B4 570 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 FFAR3O14843 346 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 GPR42O15529 346 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 PECAM1P16284 738 aaPredicted RBP8.95□□□□□ -0.98
CHD4-212ENST00000545083 KLK2P20151 261 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 FDXRP22570 491 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 EFNA3P52797 238 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 HSF1Q00613 529 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 MPP3Q13368 585 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 MSLNQ13421 630 aaPredicted RBP8.95□□□□□ -0.98
CHD4-212ENST00000545083 GRM7Q14831 915 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 KIR2DS3Q14952 304 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 BRD3Q15059 726 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 LONRF1Q17RB8 773 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 ZNF766Q5HY98 468 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 CNSTQ6PJW8 725 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 NEK10Q6ZWH5 1172 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 SNX20Q7Z614 316 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 RFX6Q8HWS3 928 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 TBC1D21Q8IYX1 336 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 C2orf73Q8N5S3 287 aaPredicted RBP8.95□□□□□ -0.98
CHD4-212ENST00000545083 OR5K2Q8NHB8 316 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 DENND1AQ8TEH3 1009 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 AGAP11Q8TF27 550 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 THAP3Q8WTV1 239 aaPredicted RBP8.95□□□□□ -0.98
CHD4-212ENST00000545083 ULK4Q96C45 1275 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 SDCCAG3Q96C92 435 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 GPR137Q96N19 417 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 APOL2Q9BQE5 337 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 MENTQ9BUN1 341 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 FICDQ9BVA6 458 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 HES7Q9BYE0 225 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 NPDC1Q9NQX5 325 aaPredicted RBP8.95□□□□□ -0.98
CHD4-212ENST00000545083 DLL4Q9NR61 685 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 ENAMQ9NRM1 1142 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 ZDHHC3Q9NYG2 299 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 CTTNBP2NLQ9P2B4 639 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 KLHL8Q9P2G9 620 aaPredicted RBP8.95□□□□□ -0.98
CHD4-212ENST00000545083 CIDEBQ9UHD4 219 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 NENFQ9UMX5 172 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 PRSS21Q9Y6M0 314 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 CPAMD8Q8IZJ3 1885 aa8.95□□□□□ -0.98
CHD4-212ENST00000545083 IGLV3-12A0A075B6K2 115 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 TRBV5-4A0A0C4DH59 114 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 TMEM200CA6NKL6 621 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 BHMG1C9JSJ3 638 aaPredicted RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 NPIPA5E9PKD4 350 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 NRP2O60462 931 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 CTSVO60911 334 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 WFS1O76024 890 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 AP2A1O95782 977 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 UQCRHP07919 91 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 ITGALP20701 1170 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 ACRV1P26436 265 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 PKLRP30613 574 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 TNNT3P45378 269 aaPredicted RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 ST13P50502 369 aaKnown RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 RAB28P51157 221 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 ZNF140P52738 457 aaPredicted RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 VSX2P58304 361 aaPredicted RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 OCA2Q04671 838 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 FOXD4Q12950 439 aaPredicted RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 PCOLCEQ15113 449 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 TCTE1Q5JU00 501 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 WASHC2DQ5SRD0 308 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 YOD1Q5VVQ6 348 aaPredicted RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 FRMPD2BQ6IN97 320 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 ALKBH5Q6P6C2 394 aaKnown RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 ZNF449Q6P9G9 518 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 FIGLAQ6QHK4 219 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 RIPOR1Q6ZS17 1223 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 RBM43Q6ZSC3 357 aaKnown RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 PID1Q7Z2X4 250 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 FGD2Q7Z6J4 655 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 TAX1BP1Q86VP1 789 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 SERPINA9Q86WD7 417 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 DOLPP1Q86YN1 238 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 DNAAF3Q8N9W5 541 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 TTC29Q8NA56 475 aaPredicted RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 SUN3Q8TAQ9 357 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 PHF10Q8WUB8 498 aaKnown RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 HEXDCQ8WVB3 486 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 TFB1MQ8WVM0 346 aaKnown RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 IL17FQ96PD4 163 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 SELENOSQ9BQE4 189 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 MAK16Q9BXY0 300 aaKnown RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 PACSIN1Q9BY11 444 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 ZNF304Q9HCX3 659 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 IL1RAPL1Q9NZN1 696 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 ZNF282Q9UDV7 671 aaPredicted RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 POLG2Q9UHN1 485 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 NPIPA1Q9UND3 350 aa8.94□□□□□ -0.98
CHD4-212ENST00000545083 RPH3AQ9Y2J0 694 aaPredicted RBP8.94□□□□□ -0.98
CHD4-212ENST00000545083 FN1P02751 2386 aaKnown RBP8.93□□□□□ -0.98
CHD4-212ENST00000545083 LOC105369274A0A096LPK9 316 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 LOC102723532A0A0G2JNH3 316 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms