RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 C1QTNF3-AMACRE9PGA6 284 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 H3BM21 787 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 MYL12BO14950 172 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 SOCS5O75159 536 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 SEMA3DO95025 777 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 NADKO95544 446 aaPredicted RBP5.65□□□□□ -1.5
VPS50-220ENST00000544910 ANGPTL1O95841 491 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 PRLP01236 227 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 SLC6A4P31645 630 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 HNF1BP35680 557 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 AKR1D1P51857 326 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 PTPN5P54829 565 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 FOXA1P55317 472 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 PRMT2P55345 433 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 LSM3P62310 102 aaKnown RBP5.65□□□□□ -1.5
VPS50-220ENST00000544910 OLR1P78380 273 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 LRRC73Q5JTD7 316 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 FAM26DQ5JW98 314 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 DGKKQ5KSL6 1271 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 GALNT18Q6P9A2 607 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 LARP4Q71RC2 724 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS50-220ENST00000544910 RAB43Q86YS6 212 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 PHACTR4Q8IZ21 702 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 CHCHD4Q8N4Q1 142 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 TTC29Q8NA56 475 aaPredicted RBP5.65□□□□□ -1.5
VPS50-220ENST00000544910 RAB2BQ8WUD1 216 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 NARS2Q96I59 477 aaKnown RBP5.65□□□□□ -1.5
VPS50-220ENST00000544910 Q96MT0 163 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 CASD1Q96PB1 797 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 BBS4Q96RK4 519 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 NSUN3Q9H649 340 aaKnown RBP5.65□□□□□ -1.5
VPS50-220ENST00000544910 TMEM45AQ9NWC5 275 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 SPO11Q9Y5K1 396 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 C2orf78A6NCI8 922 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 H3BN98 237 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 TNFRSF11BO00300 401 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 NME4O00746 187 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 HAT1O14929 419 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 GJB3O75712 270 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 BMP2P12643 396 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 MYL12AP19105 171 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 GRIA2P42262 883 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 SEMG2Q02383 582 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 CBX2Q14781 532 aaPredicted RBP5.65□□□□□ -1.5
VPS50-220ENST00000544910 ABRAXAS2Q15018 415 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 PHKG1Q16816 387 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 C16orf62Q7Z3J2 963 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 ZNF461Q8TAF7 563 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 ARRDC2Q8TBH0 407 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 PHF10Q8WUB8 498 aaKnown RBP5.65□□□□□ -1.5
VPS50-220ENST00000544910 SUSD6Q92537 303 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 PYURFQ96I23 114 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 IGSF21Q96ID5 467 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 MYRFLQ96LU7 910 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 NODALQ96S42 347 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 EPB41L1Q9H4G0 881 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 EHD1Q9H4M9 534 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 ZNF282Q9UDV7 671 aaPredicted RBP5.65□□□□□ -1.5
VPS50-220ENST00000544910 DGKBQ9Y6T7 804 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 PLXNB2O15031 1838 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 NDUFS2O75306 463 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 OR6B1O95007 311 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 RPS17P08708 135 aaKnown RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 KCNA5P22460 613 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 MYF6P23409 242 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 DDX6P26196 483 aaKnown RBP eCLIP5.65□□□□□ -1.51
VPS50-220ENST00000544910 GDF5P43026 501 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 YAP1P46937 504 aaKnown RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 IDH2P48735 452 aaKnown RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 ELP6Q0PNE2 266 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 IL18R1Q13478 541 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 KCNC3Q14003 757 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 SIM2Q14190 667 aaPredicted RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 C22orf39Q6P5X5 142 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 MTSS1LQ765P7 747 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 MFSD6LQ8IWD5 586 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 PELI3Q8N2H9 469 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 TEX26Q8N6G2 289 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 TRPV1Q8NER1 839 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 ERLEC1Q96DZ1 483 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 HERC2P3Q9BVR0 1158 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 PFDN2Q9UHV9 154 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 SPEF1Q9Y4P9 236 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 FER1L6Q2WGJ9 1857 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 A0A1W2PRG6 482 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 TCRBV3S1A0A5B6 114 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 NOS1APO75052 506 aaPredicted RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 PRKD3O94806 890 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 ZBTB11O95625 1053 aaPredicted RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 PGRP06401 933 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 MPC1LP0DKB6 136 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 GGT1P19440 569 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 PRPS1L1P21108 318 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 RPS3P23396 243 aaKnown RBP eCLIP5.65□□□□□ -1.51
VPS50-220ENST00000544910 IFNGR2P38484 337 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 UGT2B15P54855 530 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 SGCGQ13326 291 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 SMU1Q2TAY7 513 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 C18orf21Q32NC0 220 aaPredicted RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 USP39Q53GS9 565 aaKnown RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms