RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 NXT1Q9UKK6 140 aaKnown RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 SNX7Q9UNH6 387 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 PLCL2Q9UPR0 1127 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 MAN2B2Q9Y2E5 1009 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CRYL1Q9Y2S2 319 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 PCDHGB7Q9Y5F8 929 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 POLQO75417 2590 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 BHMG1C9JSJ3 638 aaPredicted RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 MEN1O00255 615 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 EIF3HO15372 352 aaKnown RBP eCLIP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 SLC16A5O15375 505 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ZSCAN9O15535 394 aaPredicted RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 KIF1CO43896 1103 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 RFPL1O75677 317 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 C1orf105O95561 183 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ALPPP05187 535 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 GSTA2P09210 222 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 MPC1LP0DKB6 136 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 MYBL2P10244 700 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 FOLR1P15328 257 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 UGT2B7P16662 529 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ITGB6P18564 788 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 POU3F2P20265 443 aaPredicted RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 PKLRP30613 574 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ARCN1P48444 511 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 AP1S2P56377 157 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 IL2P60568 153 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 SH3BP2P78314 561 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ABATP80404 500 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 CDC20Q12834 499 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 PDAP1Q13442 181 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 DNASE1L3Q13609 305 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 UBAP2LQ14157 1087 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 FRG1Q14331 258 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 SEMA3AQ14563 771 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 TGIF1Q15583 401 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 NDUFA9Q16795 377 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 FAM182AQ5T1J6 154 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 RNASEH2BQ5TBB1 312 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 RHBDD2Q6NTF9 364 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 PWWP2BQ6NUJ5 590 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 DUS1LQ6P1R4 473 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 C16orf46Q6P387 395 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 FBXO38Q6PIJ6 1188 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 MED25Q71SY5 747 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ZNF534Q76KX8 674 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 PRICKLE2Q7Z3G6 844 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 VASH2Q86V25 355 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 CAND1Q86VP6 1230 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 SLC26A11Q86WA9 606 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 SYTL1Q8IYJ3 562 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ADGRF3Q8IZF5 1079 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 NAT8LQ8N9F0 302 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 TMEM102Q8N9M5 508 aaPredicted RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 LMNTD1Q8N9Z9 388 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 GLIS1Q8NBF1 620 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 CLEC1AQ8NC01 280 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 FBXO15Q8NCQ5 510 aaPredicted RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 OR9A1PQ8NGU1 263 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 HMGCLL1Q8TB92 370 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 PYROXD1Q8WU10 500 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 TM9SF4Q92544 642 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 LPGAT1Q92604 370 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ZNF501Q96CX3 271 aaPredicted RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 TSPAN17Q96FV3 270 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 FER1L6-AS2Q96M78 137 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 CCDC138Q96M89 665 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ZNF778Q96MU6 729 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 OR2A14Q96R47 310 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 KRT12Q99456 494 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 SELENOSQ9BQE4 189 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 TRIM4Q9C037 500 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 DDX47Q9H0S4 455 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 P2RY12Q9H244 342 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 XKR8Q9H6D3 395 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 MRPS30Q9NP92 439 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 ACSS2Q9NR19 701 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 IARS2Q9NSE4 1012 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 GEMIN8Q9NWZ8 242 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 WHRNQ9P202 907 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 FBXO5Q9UKT4 447 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 CDC14AQ9UNH5 594 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 FARSAQ9Y285 508 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 DHRS7Q9Y394 339 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 NEU2Q9Y3R4 380 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 PRSS21Q9Y6M0 314 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 TLN1Q9Y490 2541 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 PIKFYVEQ9Y2I7 2098 aa5.41□□□□□ -1.54
CLSTN3-215ENST00000544584 SEC16AO15027 2179 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 NBASA2RRP1 2371 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 LOC101059948A0A1B0GTJ6 334 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 CDC14CA4D256 554 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 PMS2P1A4D2B8 440 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 URADA6NGE7 173 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 GOLGA8KD6RF30 607 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 GOLGA8TH3BQL2 631 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 BTN3A3O00478 584 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 ZNF749O43361 778 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 AVILO75366 819 aa5.4□□□□□ -1.54
CLSTN3-215ENST00000544584 IPO13O94829 963 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms