RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 CHURC1-FNTBB4DL54 471 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 GTPBP1O00178 669 aaKnown RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ENDOD1O94919 500 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 LINC00032P0C843 101 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 UNGP13051 313 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 WNT3AP56704 352 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 GAS6Q14393 721 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 KCNJ11Q14654 390 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 HSF5Q4G112 596 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 LRIF1Q5T3J3 769 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 OLFML1Q6UWY5 402 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ZNF730Q6ZMV8 503 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 COMMD2Q86X83 199 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PLD5Q8N7P1 536 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 CLHC1Q8NHS4 586 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 EDEM1Q92611 657 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ANKRA2Q9H9E1 313 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 AGO3Q9H9G7 860 aaKnown RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 NGBQ9NPG2 151 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 SNX10Q9Y5X0 201 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 C9P02748 559 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ADRA1BP35368 520 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ETV6P41212 452 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ASPAP45381 313 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 PPP3R1P63098 170 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 SNTA1Q13424 505 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 E2F2Q14209 437 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 SHHQ15465 462 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 CERCAMQ5T4B2 595 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 GRASPQ7Z6J2 395 aaPredicted RBP7.65□□□□□ -1.18
VPS13D-211ENST00000543710 LAPTM4BQ86VI4 370 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 CHERPQ8IWX8 916 aaKnown RBP7.65□□□□□ -1.18
VPS13D-211ENST00000543710 NAT16Q8N8M0 369 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 OR56A1Q8NGH5 318 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 MR1Q95460 341 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 SLC35G5Q96KT7 338 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 SEMA3CQ99985 751 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 MRI1Q9BV20 369 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 EDEM2Q9BV94 578 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 TELO2Q9Y4R8 837 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 YDJCA8MPS7 323 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 MCIDASD6RGH6 385 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 B3GALT2O43825 422 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 PET100P0DJ07 73 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 SLC6A4P31645 630 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 IGFALSP35858 605 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ADAM15Q13444 863 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 IL18Q14116 193 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 TAF5Q15542 800 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ARSHQ5FYA8 562 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 EIF5AL1Q6IS14 154 aaKnown RBP7.65□□□□□ -1.18
VPS13D-211ENST00000543710 MTFR2Q6P444 385 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ARHGAP36Q6ZRI8 547 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 TMEM110Q86TL2 294 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 AMIGO1Q86WK6 493 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 GID4Q8IVV7 300 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 COPS5Q92905 334 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ZBED6CLQ96FA7 236 aaPredicted RBP7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ACTR6Q9GZN1 396 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ITM2CQ9NQX7 267 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 BAIAP2Q9UQB8 552 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ADAMTSL3P82987 1691 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 A0A1B0GVC2 190 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 EIF3FO00303 357 aaPredicted RBP7.65□□□□□ -1.18
VPS13D-211ENST00000543710 GNB5O14775 395 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 TLX3O43711 291 aaPredicted RBP7.65□□□□□ -1.18
VPS13D-211ENST00000543710 STK16O75716 305 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 SCGNO76038 276 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ANGPTL1O95841 491 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 CHRNA1P02708 482 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 EPCAMP16422 314 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 GSTM2P28161 218 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 HOXC8P31273 242 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 RPL4P36578 427 aaKnown RBP7.65□□□□□ -1.18
VPS13D-211ENST00000543710 CLCN4P51793 760 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 SLC7A2P52569 658 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 CRISP3P54108 245 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 MANFP55145 182 aaKnown RBP7.65□□□□□ -1.18
VPS13D-211ENST00000543710 DAG1Q14118 895 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 EPGNQ6UW88 154 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ZCCHC23Q6ZST2 131 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 NAT8LQ8N9F0 302 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 BBS10Q8TAM1 723 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 KBTBD7Q8WVZ9 684 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 EPYCQ99645 322 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 FAM83CQ9BQN1 747 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 MRPL45Q9BRJ2 306 aaKnown RBP7.65□□□□□ -1.18
VPS13D-211ENST00000543710 DCUN1D5Q9BTE7 237 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 CCDC32Q9BV29 185 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ZDHHC18Q9NUE0 388 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 PNPOQ9NVS9 261 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 MARK1Q9P0L2 795 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 SERTAD3Q9UJW9 196 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 CYP8B1Q9UNU6 501 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 CMAHPQ9Y471 501 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 ANKRD36CQ5JPF3 1778 aa7.65□□□□□ -1.18
VPS13D-211ENST00000543710 EFCAB7A8K855 629 aa7.65□□□□□ -1.19
VPS13D-211ENST00000543710 PRKYO43930 277 aa7.65□□□□□ -1.19
VPS13D-211ENST00000543710 METTL18O95568 372 aa7.65□□□□□ -1.19
VPS13D-211ENST00000543710 HLA-DQA2P01906 255 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms