RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
PPME1-208ENST00000543525 ELMOD1Q8N336 334 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 L3MBTL4Q8NA19 623 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 NETO1Q8TDF5 533 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 RAB2BQ8WUD1 216 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
PPME1-208ENST00000543525 HSPBAP1Q96EW2 488 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 AMBRA1Q9C0C7 1298 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SUV39H2Q9H5I1 410 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 IL21Q9HBE4 155 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SERHLQ9NQF3 203 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 CFAP97Q9P2B7 532 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 DLGAP4Q9Y2H0 992 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 PCDHGA8Q9Y5G5 932 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SNX5Q9Y5X3 404 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 IGLV3-16A0A075B6K0 115 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 LOC100130705A0A1B0GUX0 176 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SERTM1A2A2V5 107 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 EVPLLA8MZ36 301 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 NPIPB8E9PQR5 432 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 NUAK1O60285 661 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 BMP1P13497 986 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
PPME1-208ENST00000543525 CCL23P55773 120 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 NFATC3Q12968 1075 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SP140Q13342 867 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 BOP1Q14137 746 aaKnown RBP13.13□□□□□ -0.31
PPME1-208ENST00000543525 MOGQ16653 247 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 MEP1AQ16819 746 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 ZNF829Q3KNS6 432 aaPredicted RBP13.13□□□□□ -0.31
PPME1-208ENST00000543525 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 ZC3H12BQ5HYM0 836 aaKnown RBP13.13□□□□□ -0.31
PPME1-208ENST00000543525 XAF1Q6GPH4 301 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 ANKRD26P1Q6NSI1 321 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 ELMSAN1Q6PJG2 1045 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 DEFB128Q7Z7B8 93 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SPARTQ8N0X7 666 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SLC39A11Q8N1S5 342 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 ARL10Q8N8L6 244 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SKA2Q8WVK7 121 aaPredicted RBP13.13□□□□□ -0.31
PPME1-208ENST00000543525 NELL1Q92832 810 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 ABTB1Q969K4 478 aaPredicted RBP13.13□□□□□ -0.31
PPME1-208ENST00000543525 TSSK3Q96PN8 268 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 INPP5KQ9BT40 448 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 LHPPQ9H008 270 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 PRO3102Q9H379 93 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SLC6A13Q9NSD5 602 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 DNAJC11Q9NVH1 559 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 HECAQ9UBI9 543 aaPredicted RBP13.13□□□□□ -0.31
PPME1-208ENST00000543525 UTS2RQ9UKP6 389 aa13.13□□□□□ -0.31
PPME1-208ENST00000543525 SAMD4AQ9UPU9 718 aaKnown RBP13.13□□□□□ -0.31
PPME1-208ENST00000543525 TRIOBPQ9H2D6 2365 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 KPNA5O15131 536 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
PPME1-208ENST00000543525 DNAJB5O75953 348 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 BCL10O95999 233 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 GNRH1P01148 92 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 CKMP06732 381 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 MYCLP1P12525 358 aaPredicted RBP13.12□□□□□ -0.31
PPME1-208ENST00000543525 SRCP12931 536 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 HOXB9P17482 250 aaPredicted RBP13.12□□□□□ -0.31
PPME1-208ENST00000543525 CYP2A7P20853 494 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 SLC6A12P48065 614 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 TRPC1P48995 793 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 RAB15P59190 212 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 B4GALNT1Q00973 533 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 GBX1Q14549 363 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 PLEKHS1Q5SXH7 462 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 ZNF691Q5VV52 312 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 BBS7Q8IWZ6 715 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 HS3ST5Q8IZT8 346 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 ASB11Q8WXH4 323 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 ECHDC3Q96DC8 303 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 GPN2Q9H9Y4 310 aaPredicted RBP13.12□□□□□ -0.31
PPME1-208ENST00000543525 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 PSME2Q9UL46 239 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 CLEC4EQ9ULY5 219 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 TET1Q8NFU7 2136 aa13.12□□□□□ -0.31
PPME1-208ENST00000543525 TMX2-CTNND1H3BSU7 103 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 RFXANKO14593 260 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 SLC16A6O15403 523 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 CCNDBP1O95273 360 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 GSNP06396 782 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 ITGAMP11215 1152 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 SDC1P18827 310 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 GABRR2P28476 465 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 RYKP34925 604 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 PIGAP37287 484 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 NEK2P51955 445 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 SLC7A9P82251 487 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 CYP4F8P98187 520 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 SEMG2Q02383 582 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 PTSQ03393 145 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 CD47Q08722 323 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 HSPA14Q0VDF9 509 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 CES5AQ6NT32 575 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 C22orf39Q6P5X5 142 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 SHQ1Q6PI26 577 aaKnown RBP13.11□□□□□ -0.31
PPME1-208ENST00000543525 Q6ZNX1 250 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms