RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TRMT10BQ6PF06 316 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 C8orf59Q8N0T1 100 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC39A11Q8N1S5 342 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 C11orf65Q8NCR3 313 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF671Q8TAW3 534 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 MAPK15Q8TD08 544 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 HOPXQ9BPY8 73 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CDADC1Q9BWV3 514 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 ACSS2Q9NR19 701 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CLN6Q9NWW5 311 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 SRPK3Q9UPE1 567 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 WDR37Q9Y2I8 494 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 A0A1W2PQU0 124 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 PDPK1O15530 556 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 PROM1O43490 865 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 PLIN3O60664 434 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 EDF1O60869 148 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF217O75362 1048 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TMEM63AO94886 807 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 LATS1O95835 1130 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 MPIP34949 423 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 USP46P62068 366 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 MYBPC1Q00872 1141 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TCEAL5Q5H9L2 206 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 MAMSTRQ6ZN01 415 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 HM13Q8TCT9 377 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 GPR151Q8TDV0 419 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 OR2M4Q96R27 311 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 USP29Q9HBJ7 922 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 NDUFA13Q9P0J0 144 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 EGFL7Q9UHF1 273 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 IKZF3Q9UKT9 509 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 SH3GLB1Q9Y371 365 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 PCDHGB5Q9Y5G0 923 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 GMPPBQ9Y5P6 360 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 NUP188Q5SRE5 1749 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 DHRS12A0PJE2 317 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TUBAL3A6NHL2 446 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 NDUFS4O43181 175 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 REM1O75628 298 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 WFS1O76024 890 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 MFN2O95140 757 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TCF4P15884 667 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 FGFR3P22607 806 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 HOXD13P35453 343 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ACTR3P61158 418 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PON2Q15165 354 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TRIM71Q2Q1W2 868 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC44A4Q53GD3 710 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PRRT3Q5FWE3 981 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 KLHL24Q6TFL4 600 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF730Q6ZMV8 503 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 DCUN1D3Q8IWE4 304 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PYDC1Q8WXC3 89 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SMPDL3BQ92485 455 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TPSD1Q9BZJ3 242 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 GALNT8Q9NY28 637 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 GDE1Q9NZC3 331 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 KLHL18O94889 574 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 EPOP01588 193 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SYPP08247 313 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ATP5A1P25705 553 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 GKP32189 559 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SCAND1P57086 179 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 GALNT1Q10472 559 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TIMM50Q3ZCQ8 353 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM91A1Q658Y4 838 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TMEM126BQ8IUX1 230 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 GJD3Q8N144 294 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 IL22RA1Q8N6P7 574 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RASSF5Q8WWW0 418 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TOP1MTQ969P6 601 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 GATA5Q9BWX5 397 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 MCCC2Q9HCC0 563 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ATXN10Q9UBB4 475 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 C19orf25Q9UFG5 118 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TELO2Q9Y4R8 837 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 A8MVJ9 347 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SASH3O75995 380 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 OAS1P00973 400 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SERPINB1P30740 379 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC25A11Q02978 314 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PERM1Q5SV97 790 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RNF43Q68DV7 783 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PROSER1Q86XN7 944 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 CPNE8Q86YQ8 564 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 LIX1Q8N485 282 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TERB1Q8NA31 727 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RNASE11Q8TAA1 199 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF483Q8TF39 744 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RGMAQ96B86 450 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PSKH2Q96QS6 385 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ACSL5Q9ULC5 683 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 GSTK1Q9Y2Q3 226 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RGPD2P0DJD1 1756 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 OR5K4A6NMS3 321 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PCDH7O60245 1069 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RNGTTO60942 597 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TULP3O75386 442 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 GSRP00390 522 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms