RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 FAM136AQ96C01 138 aa16.79■□□□□ 0.28
LTBR-210ENST00000542830 RUNDC3BQ96NL0 473 aa16.79■□□□□ 0.28
LTBR-210ENST00000542830 FAM167BQ9BTA0 163 aa16.79■□□□□ 0.28
LTBR-210ENST00000542830 NDC1Q9BTX1 674 aa16.79■□□□□ 0.28
LTBR-210ENST00000542830 FAM114A2Q9NRY5 505 aa16.79■□□□□ 0.28
LTBR-210ENST00000542830 C20orf96Q9NUD7 363 aaPredicted RBP16.79■□□□□ 0.28
LTBR-210ENST00000542830 EURLQ9NYK6 297 aa16.79■□□□□ 0.28
LTBR-210ENST00000542830 RUVBL2Q9Y230 463 aaKnown RBP16.79■□□□□ 0.28
LTBR-210ENST00000542830 TARM1B6A8C7 271 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 DNALI1O14645 258 aaPredicted RBP16.78■□□□□ 0.28
LTBR-210ENST00000542830 HCRTR1O43613 425 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 PRICKLE3O43900 615 aaPredicted RBP16.78■□□□□ 0.28
LTBR-210ENST00000542830 TTC4O95801 387 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 CATP04040 527 aaKnown RBP16.78■□□□□ 0.28
LTBR-210ENST00000542830 ARSFP54793 590 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 DCDP81605 110 aaKnown RBP16.78■□□□□ 0.28
LTBR-210ENST00000542830 CTBP1Q13363 440 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 CYP2A13Q16696 494 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 ACSBG2Q5FVE4 666 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 FIGLAQ6QHK4 219 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 NEK10Q6ZWH5 1172 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 MCATQ8IVS2 390 aaKnown RBP16.78■□□□□ 0.28
LTBR-210ENST00000542830 DENND6AQ8IWF6 608 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■■■■ 95.3
LTBR-210ENST00000542830 ADAMTS17Q8TE56 1095 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 GBP5Q96PP8 586 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 DDX47Q9H0S4 455 aaKnown RBP16.78■□□□□ 0.28
LTBR-210ENST00000542830 FBXO6Q9NRD1 293 aaPredicted RBP16.78■□□□□ 0.28
LTBR-210ENST00000542830 GPN3Q9UHW5 284 aaPredicted RBP16.78■□□□□ 0.28
LTBR-210ENST00000542830 TLK1Q9UKI8 766 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 FAM169AQ9Y6X4 670 aa16.78■□□□□ 0.28
LTBR-210ENST00000542830 PSIP1O75475 530 aaKnown RBP16.77■□□□□ 0.28
LTBR-210ENST00000542830 WISP1O95388 367 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 CBSLP0DN79 551 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 ENO3P13929 434 aaPredicted RBP16.77■□□□□ 0.28
LTBR-210ENST00000542830 PGAM1P18669 254 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 CBSP35520 551 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 SLC1A2P43004 574 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 CLCN7P51798 805 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 GNG11P61952 73 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 ARHGAP19Q14CB8 494 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 KLHL38Q2WGJ6 581 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 CCSMST1Q4G0I0 132 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 TCTE1Q5JU00 501 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 YOD1Q5VVQ6 348 aaPredicted RBP16.77■□□□□ 0.28
LTBR-210ENST00000542830 PAPD7Q5XG87 772 aaKnown RBP16.77■□□□□ 0.28
LTBR-210ENST00000542830 SYDE1Q6ZW31 735 aaPredicted RBP16.77■□□□□ 0.28
LTBR-210ENST00000542830 RAB43Q86YS6 212 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 AGGF1Q8N302 714 aaeCLIP16.77■□□□□ 0.28
LTBR-210ENST00000542830 OR9A1PQ8NGU1 263 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 PDLIM2Q96JY6 352 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 NAT9Q9BTE0 207 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 ING2Q9H160 280 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 ACSS2Q9NR19 701 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 IFT80Q9P2H3 777 aaPredicted RBP16.77■□□□□ 0.28
LTBR-210ENST00000542830 GALPQ9UBC7 116 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 NDOR1Q9UHB4 597 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 TSR3Q9UJK0 312 aaKnown RBP16.77■□□□□ 0.28
LTBR-210ENST00000542830 FBXO5Q9UKT4 447 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 TP53TG5Q9Y2B4 290 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 KLHL20Q9Y2M5 609 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 KLK4Q9Y5K2 254 aa16.77■□□□□ 0.28
LTBR-210ENST00000542830 ARGFXA6NJG6 315 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 USP27XA6NNY8 438 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 ZNF839A8K0R7 811 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 MYO1CO00159 1063 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 ERGP11308 486 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 HSD17B2P37059 387 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 CASRP41180 1078 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 GRIA3P42263 894 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 CSRP3P50461 194 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 KCNC4Q03721 635 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 KLRB1Q12918 225 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 C1orf189Q5VU69 101 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 MLIPQ5VWP3 458 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 FCRL6Q6DN72 434 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 KCNMB4Q86W47 210 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 OR2L3Q8NG85 312 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 IP6K3Q96PC2 410 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 NAPGQ99747 312 aaPredicted RBP16.76■□□□□ 0.27
LTBR-210ENST00000542830 SELENOSQ9BQE4 189 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 ENAMQ9NRM1 1142 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 DHCR7Q9UBM7 475 aaKnown RBP16.76■□□□□ 0.27
LTBR-210ENST00000542830 SAR1BQ9Y6B6 198 aa16.76■□□□□ 0.27
LTBR-210ENST00000542830 ARHGEF33A8MVX0 844 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 SMAPO00193 183 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 EIF3FO00303 357 aaPredicted RBP16.75■□□□□ 0.27
LTBR-210ENST00000542830 SRPX2O60687 465 aaPredicted RBP16.75■□□□□ 0.27
LTBR-210ENST00000542830 DNAJB5O75953 348 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 CTSBP07858 339 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 MPC1LP0DKB6 136 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 PIM1P11309 404 aaPredicted RBP16.75■□□□□ 0.27
LTBR-210ENST00000542830 CMPK1P30085 196 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 PTGIRP43119 386 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 RRADP55042 308 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 DHX9Q08211 1270 aaKnown RBP16.75■□□□□ 0.27
LTBR-210ENST00000542830 SSPNQ14714 243 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 GRM7Q14831 915 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 CRYMQ14894 314 aa16.75■□□□□ 0.27
LTBR-210ENST00000542830 NKAIN1Q4KMZ8 207 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms