RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 ISG20Q96AZ6 181 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 LRRC45Q96CN5 670 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ZFYVE19Q96K21 471 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ZNF599Q96NL3 588 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 LRRC3BQ96PB8 259 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 FEM1AQ9BSK4 669 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RPP25Q9BUL9 199 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 HIPK2Q9H2X6 1198 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 TBC1D17Q9HA65 648 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 LTB4R2Q9NPC1 389 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 SNX15Q9NRS6 342 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.43□□□□□ -1.7
MDM2-228ENST00000542502 ELOVL2Q9NXB9 296 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 GAR1Q9NY12 217 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 LPAR3Q9UBY5 353 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 SLC25A13Q9UJS0 675 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 GGA2Q9UJY4 613 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 VPS28Q9UK41 221 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 SLC39A10Q9ULF5 831 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 VANGL2Q9ULK5 521 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 CA14Q9ULX7 337 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 DRG1Q9Y295 367 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 PPP2R2CQ9Y2T4 447 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 JRKLQ9Y4A0 524 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 HS3ST3B1Q9Y662 390 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 KIAA1549LQ6ZVL6 1849 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 MYO18AQ92614 2054 aaKnown RBP4.42□□□□□ -1.7
MDM2-228ENST00000542502 CACNA1HO95180 2353 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 MACROD2A1Z1Q3 448 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 HACD1B0YJ81 288 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 TSPAN3O60637 253 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 ZNF217O75362 1048 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 TECTAO75443 2155 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 INMTO95050 263 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CISD3P0C7P0 127 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 VCANP13611 3396 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 KRT10P13645 584 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 ARSAP15289 507 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CA4P22748 312 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 KDELR1P24390 212 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CTNNA2P26232 953 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 NTSR1P30989 418 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CTNNA1P35221 906 aaKnown RBP4.42□□□□□ -1.7
MDM2-228ENST00000542502 DPP6P42658 865 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 SUOXP51687 545 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CDH6P55285 790 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 RPS13P62277 151 aaKnown RBP4.42□□□□□ -1.7
MDM2-228ENST00000542502 CCZ1BP86790 482 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CCZ1P86791 482 aaPredicted RBP4.42□□□□□ -1.7
MDM2-228ENST00000542502 SLC25A11Q02978 314 aaKnown RBP4.42□□□□□ -1.7
MDM2-228ENST00000542502 GNA12Q03113 381 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 SEMA3BQ13214 749 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 BLMHQ13867 455 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 TUBB2AQ13885 445 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 PDK1Q15118 436 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 RPS6KA1Q15418 735 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 ELF2Q15723 593 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 PDCD2Q16342 344 aaPredicted RBP4.42□□□□□ -1.7
MDM2-228ENST00000542502 PTCHD3Q3KNS1 767 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 ZNF528Q3MIS6 628 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 ANKRD20A8PQ5CZ79 823 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 MANEALQ5VSG8 457 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 OTUD1Q5VV17 481 aaPredicted RBP4.42□□□□□ -1.7
MDM2-228ENST00000542502 FAM46CQ5VWP2 391 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 PLAG1Q6DJT9 500 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 NADSYN1Q6IA69 706 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 TRNP1Q6NT89 227 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 TLDC1Q6P9B6 456 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 RFWD3Q6PCD5 774 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 C4orf22Q6V702 233 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 DCDC5Q6ZRR9 648 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 SYT13Q7L8C5 426 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 PHLDB2Q86SQ0 1253 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 ZSCAN30Q86W11 494 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CARNMT1Q8N4J0 409 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 DCAF4L2Q8NA75 395 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 GLIS1Q8NBF1 620 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 MYRIPQ8NFW9 859 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 HSPH1Q92598 858 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 MUL1Q969V5 352 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CTHRC1Q96CG8 243 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 ARHGEF26Q96DR7 871 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 TSGA13Q96PP4 275 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 RNF157Q96PX1 679 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 TRMOQ9BU70 441 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 SNRNP25Q9BV90 132 aaKnown RBP4.42□□□□□ -1.7
MDM2-228ENST00000542502 TUBB2BQ9BVA1 445 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CALN1Q9BXU9 219 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 MAGEB5Q9BZ81 275 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CARD9Q9H257 536 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 LMAN1LQ9HAT1 526 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 HEYLQ9NQ87 328 aaPredicted RBP4.42□□□□□ -1.7
MDM2-228ENST00000542502 TM7SF3Q9NS93 570 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 ABCB8Q9NUT2 735 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 ZSCAN32Q9NX65 697 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 RNF14Q9UBS8 474 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 DKK4Q9UBT3 224 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 PCSK1NQ9UHG2 260 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 FBXO4Q9UKT5 387 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms