RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SUSD1Q6UWL2 747 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 LRRC31Q6UY01 552 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 MSANTD1Q6ZTZ1 278 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 FOXL2NBQ6ZUU3 175 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 C9orf139Q6ZV77 190 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 PLEKHM3Q6ZWE6 761 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 HAUS6Q7Z4H7 955 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 ITPRIPQ8IWB1 547 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 PM20D2Q8IYS1 436 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 MAML2Q8IZL2 1156 aaPredicted RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 SLC7A5P1Q8MH63 180 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 LSMEM2Q8N112 164 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 LRRC43Q8N309 656 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 RASGEF1CQ8N431 466 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 CARNMT1Q8N4J0 409 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 SLC5A8Q8N695 610 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 CAMKVQ8NCB2 501 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 OR13A1Q8NGR1 328 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 CFAP61Q8NHU2 1237 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 GRK7Q8WTQ7 553 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 TMEM255BQ8WV15 326 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 CDKL2Q92772 493 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 SNX21Q969T3 373 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 CCDC43Q96MW1 224 aaKnown RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 PKP4Q99569 1192 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 CGREF1Q99674 301 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 MGME1Q9BQP7 344 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 UPF3BQ9BZI7 483 aaKnown RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 GPR88Q9GZN0 384 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 KCNK15Q9H427 330 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 DNAJC18Q9H819 358 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 PARVGQ9HBI0 331 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 KLHL1Q9NR64 748 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 TCP11L1Q9NUJ3 509 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 OLAHQ9NV23 265 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 HAO2Q9NYQ3 351 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 AIPL1Q9NZN9 384 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 HACL1Q9UJ83 578 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 MTUS1Q9ULD2 1270 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 ZNF510Q9Y2H8 683 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 MAPK8IP3Q9UPT6 1336 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 EIF3AQ14152 1382 aaKnown RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 TONSLQ96HA7 1378 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 CECR2Q9BXF3 1484 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 WDR97A6NE52 1622 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 A0A0B4J203 849 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 A0A0U1RQK1 487 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 LINC00854A0A1B0GVQ3 168 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 CLRN2A0PK11 232 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 ERICH2A1L162 156 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 ZNF320A2RRD8 509 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 H0YIN7 160 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 CAPN9O14815 690 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 CASQ2O14958 399 aaPredicted RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 POLR3GO15318 223 aaPredicted RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 BIRC5O15392 142 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 BUD23O43709 281 aaKnown RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 TSPAN1O60635 241 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 B3GALNT1O75752 331 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 RSL1D1O76021 490 aaKnown RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 ZNF432O94892 652 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 GOSR1O95249 250 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 BCL10O95999 233 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 GH2P01242 217 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 S100A6P06703 90 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 VIMP08670 466 aaKnown RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 LINGO3P0C6S8 592 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 CCDC166P0CW27 439 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 RPS2P15880 293 aaKnown RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 PCGF2P35227 344 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 ATP6V1E1P36543 226 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 HNF4AP41235 474 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 RANBP1P43487 201 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 ALDH3A2P51648 485 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 CAPZA1P52907 286 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 CTSCP53634 463 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 MLLT10P55197 1068 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 DLX5P56178 289 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 UBASH3AP57075 661 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 PITX1P78337 314 aaPredicted RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 DR1Q01658 176 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 CUL3Q13618 768 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 PTK6Q13882 451 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 BTG3Q14201 252 aaPredicted RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 KRT33BQ14525 404 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 MORF4L2Q15014 288 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 ZNF674Q2M3X9 581 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 TYSND1Q2T9J0 566 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 MPP7Q5T2T1 576 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 ZDHHC20Q5W0Z9 365 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 LCN10Q6JVE6 187 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 FAM171BQ6P995 826 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 FIP1L1Q6UN15 594 aaKnown RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 Q6ZTC4 211 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 KCTD8Q6ZWB6 473 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 MCM10Q7L590 875 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 NLRP9Q7RTR0 991 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 PIWIL3Q7Z3Z3 882 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms