RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TUFT1Q9NNX1 390 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 MMP25Q9NPA2 562 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 KLHL1Q9NR64 748 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 MCM9Q9NXL9 1143 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 RCC2Q9P258 522 aaKnown RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 GAGE2DQ9UEU5 116 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 PTGDR2Q9Y5Y4 395 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 COL24A1Q17RW2 1714 aa4.06□□□□□ -1.76
SNHG1-217ENST00000541578 ARHGEF28Q8N1W1 1705 aaKnown RBP4.06□□□□□ -1.76
SNHG1-217ENST00000541578 CCDC7Q96M83 1385 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 ZNF541Q9H0D2 1346 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 C15orf62A8K5M9 175 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 YDJCA8MPS7 323 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 FAM86B1E9PN63 330 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 KINO60870 393 aaKnown RBP4.05□□□□□ -1.76
SNHG1-217ENST00000541578 RTN2O75298 545 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 B3GALNT1O75752 331 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 LCATP04180 440 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 ACAA1P09110 424 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-217ENST00000541578 HMOX1P09601 288 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 FAM86B2P0C5J1 330 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 OR2T7P0C7T2 308 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 ITIH1P19827 911 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 UGT1A1P22309 533 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 KCNA5P22460 613 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 PSMC4P43686 418 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 NUDT6P53370 316 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 LIMK1P53667 647 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 SEC61BP60468 96 aaKnown RBP4.05□□□□□ -1.76
SNHG1-217ENST00000541578 ASIC1P78348 528 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 PDE1BQ01064 536 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 WASHC5Q12768 1159 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 TRAF1Q13077 416 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 ITGA7Q13683 1181 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 KBTBD12Q3ZCT8 623 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 AMZ1Q400G9 498 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 MDH1BQ5I0G3 518 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 GCNT6Q5T4J0 391 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 C18orf63Q68DL7 685 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 FAM198BQ6UWH4 519 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 FAM43BQ6ZT52 329 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-217ENST00000541578 ZNF534Q76KX8 674 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 ZNF367Q7RTV3 350 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 DSG4Q86SJ6 1040 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 MAP7D3Q8IWC1 876 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 RYBPQ8N488 228 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-217ENST00000541578 C1orf52Q8N6N3 182 aaKnown RBP4.05□□□□□ -1.76
SNHG1-217ENST00000541578 PPFIBP2Q8ND30 876 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 ANKRD20A12PQ8NF67 263 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 OR7G3Q8NG95 312 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 OR2AJ1Q8NGZ0 328 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 ELP5Q8TE02 316 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 NUDCD2Q8WVJ2 157 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 RND1Q92730 232 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 SYN2Q92777 582 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-217ENST00000541578 MED30Q96HR3 178 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 RUNDC3BQ96NL0 473 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 CTAGE1Q96RT6 745 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 SEMA6AQ9H2E6 1030 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 TNMDQ9H2S6 317 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 FZD8Q9H461 694 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 TMEM206Q9H813 350 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 MINDY3Q9H8M7 445 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 FZD10Q9ULW2 581 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 CHKBQ9Y259 395 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 TMEM184BQ9Y519 407 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-217ENST00000541578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.05□□□□□ -1.76
SNHG1-217ENST00000541578 SNX9Q9Y5X1 595 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 TOPAZ1Q8N9V7 1692 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 EVPLQ92817 2033 aa4.05□□□□□ -1.76
SNHG1-217ENST00000541578 WDR90Q96KV7 1748 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PEAK1Q9H792 1746 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 CRYBG1Q9Y4K1 1723 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 POLR3AO14802 1390 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PLEKHH1Q9ULM0 1364 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PHRF1Q9P1Y6 1649 aaKnown RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 A0A1W2PPW3 197 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 EME2A4GXA9 379 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 CCDC69A6NI79 296 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 INAFM1C9JVW0 142 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 FAM90A26D6RGX4 464 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PRSS44E7EML9 344 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PRR23D1E9PI22 279 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 SOCS6O14544 535 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 RGS14O43566 566 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 BUD23O43709 281 aaKnown RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 SERPINI2O75830 405 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 ACSL3O95573 720 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PLA2G4BP0C869 781 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PRR23D2P0DMB1 279 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PLA2G2AP14555 144 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 GNLYP22749 145 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 MAPK3P27361 379 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 DEKP35659 375 aaKnown RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 GNL1P36915 607 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 APOBEC1P41238 236 aaKnown RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 RFX5P48382 616 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PCYT1AP49585 367 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 CRYZQ08257 329 aaKnown RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 Q0VFX4 171 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms