RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SPATA3Q8NHX4 192 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ZFPM2Q8WW38 1151 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PTERQ96BW5 349 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 CNDP1Q96KN2 507 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 SMIM14Q96QK8 99 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 LMF1Q96S06 567 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 LYSMD1Q96S90 227 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 C11orf70Q9BRQ4 267 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 CNPY3Q9BT09 278 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 SELENOOQ9BVL4 669 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 SLC7A5P2Q9GIP4 190 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 GPATCH2LQ9NWQ4 482 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 HRASLS2Q9NWW9 162 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 SOHLH2Q9NX45 425 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PKD2L2Q9NZM6 624 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 HOOK1Q9UJC3 728 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 SERTAD3Q9UJW9 196 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PLA2G2DQ9UNK4 145 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 DNAJC16Q9Y2G8 782 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PCDHGB6Q9Y5F9 930 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 SEC16AO15027 2179 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 MYO7BQ6PIF6 2116 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ANKRD36A6QL64 1941 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 CCDC78A2IDD5 438 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 CCDC66A2RUB6 948 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ANKRD62A6NC57 917 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 OR14I1A6ND48 311 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 SIGLEC16A6NMB1 481 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 TMEM150CB9EJG8 249 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 E7EQ34 232 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 PPP1R12AO14974 1030 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ZNF749O43361 778 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 MAFKO60675 156 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 CDK14O94921 469 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 UNC5CO95185 931 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 SLC25A14O95258 325 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 LCA5LO95447 670 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 CLDN7O95471 211 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 CRYABP02511 175 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 UMODP07911 640 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 DBHP09172 617 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 CBSLP0DN79 551 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 GLI4P10075 376 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 IL4RP24394 825 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 CBSP35520 551 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 HCAR3P49019 387 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ZNF135P52742 658 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 DRG2P55039 364 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ERVFRD-1P60508 538 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 MAXP61244 160 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 RPL26P61254 145 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 CSNK1G2P78368 415 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 DCDP81605 110 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 LTBQ06643 244 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 PTP4A2Q12974 167 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 MFAP5Q13361 173 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 LSAMPQ13449 338 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 PKP1Q13835 747 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 RPE65Q16518 533 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 C21orf62-AS1Q17RA5 79 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 LONRF2Q1L5Z9 754 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ANKRD20A8PQ5CZ79 823 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 MARC1Q5VT66 337 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 MLIPQ5VWP3 458 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 FAAH2Q6GMR7 532 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ARMC6Q6NXE6 501 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ISLR2Q6UXK2 745 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 MEX3BQ6ZN04 569 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 RFX8Q6ZV50 586 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 TAOK1Q7L7X3 1001 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ZNF547Q8IVP9 402 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ELOA2Q8IYF1 753 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 TTC30BQ8N4P2 665 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 NPWQ8N729 165 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 C3orf20Q8ND61 904 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 OR1N1Q8NGS0 311 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 GPR150Q8NGU9 434 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 PROKR1Q8TCW9 393 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 CCHCR1Q8TD31 782 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ADAMTS18Q8TE60 1221 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 NSMCE1Q8WV22 266 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 NINJ1Q92982 152 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 GLYATL1Q969I3 302 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 MAGEB10Q96LZ2 347 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 TAAR6Q96RI8 345 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ZSCAN5AQ9BUG6 496 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 NAA15Q9BXJ9 866 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 TLR10Q9BXR5 811 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 AP1M1Q9BXS5 423 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 LHPPQ9H008 270 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 DHX35Q9H5Z1 703 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ARFGAP3Q9NP61 516 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 SLC6A20Q9NP91 592 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 DLL4Q9NR61 685 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ADAM22Q9P0K1 906 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ABI3Q9P2A4 366 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 KLHL14Q9P2G3 628 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 IFT80Q9P2H3 777 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 NFKBIL1Q9UBC1 381 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 SEC14L3Q9UDX4 400 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms