RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 MED25Q71SY5 747 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 MCATQ8IVS2 390 aaKnown RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 REXO1L1PQ8IX06 675 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 TMEM102Q8N9M5 508 aaPredicted RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 ACTRT1Q8TDG2 376 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 COG1Q8WTW3 980 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 SERPINB12Q96P63 405 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 OSBPL9Q96SU4 736 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 NDC1Q9BTX1 674 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 INTS10Q9NVR2 710 aaKnown RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 SPATA7Q9P0W8 599 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 DHCR7Q9UBM7 475 aaKnown RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 GPN3Q9UHW5 284 aaPredicted RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 RUVBL2Q9Y230 463 aaKnown RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 CRYL1Q9Y2S2 319 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 PHF2O75151 1096 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 CEACAM4O75871 244 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 MATN4O95460 622 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 PKMP14618 531 aaKnown RBP20.14■□□□□ 0.81
CHFR-217ENST00000540537 MAGEA3P43357 314 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 FNTAP49354 379 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 PGDP52209 483 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 RRADP55042 308 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 CCSMST1Q4G0I0 132 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 NKAIN1Q4KMZ8 207 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 MLIPQ5VWP3 458 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 CNSTQ6PJW8 725 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 SLC35F6Q8N357 371 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 DENND1AQ8TEH3 1009 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 GRK7Q8WTQ7 553 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 ZUFSPQ96AP4 578 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 ZNF669Q96BR6 464 aaPredicted RBP20.14■□□□□ 0.81
CHFR-217ENST00000540537 IP6K3Q96PC2 410 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 TRIM56Q9BRZ2 755 aaKnown RBP20.14■□□□□ 0.81
CHFR-217ENST00000540537 ENAMQ9NRM1 1142 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 IFT80Q9P2H3 777 aaPredicted RBP20.14■□□□□ 0.81
CHFR-217ENST00000540537 NDOR1Q9UHB4 597 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 PCDHGB7Q9Y5F8 929 aa20.14■□□□□ 0.81
CHFR-217ENST00000540537 SPENQ96T58 3664 aaKnown RBP20.13■□□□□ 0.81
CHFR-217ENST00000540537 GOLGA6L10A0A0M3HER8 536 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 TARM1B6A8C7 271 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 GOLGA8MH3BSY2 632 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 ZSCAN12O43309 604 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 CHRM3P20309 590 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 ARSFP54793 590 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 ATP1A4Q13733 1029 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 SSPNQ14714 243 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 ZNF470Q6ECI4 717 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 GRPEL1Q9HAV7 217 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 KLK4Q9Y5K2 254 aa20.13■□□□□ 0.81
CHFR-217ENST00000540537 PCM1Q15154 2024 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 ZCWPW2A0A1B0GU75 182 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 E5RI56 91 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 CES2O00748 559 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 FOLR3P41439 243 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 GRIA3P42263 894 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 THOC5Q13769 683 aaKnown RBP20.12■□□□□ 0.81
CHFR-217ENST00000540537 CYP2A13Q16696 494 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 TCTE1Q5JU00 501 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 COLEC12Q5KU26 742 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 YOD1Q5VVQ6 348 aaPredicted RBP20.12■□□□□ 0.81
CHFR-217ENST00000540537 MRPL14Q6P1L8 145 aaKnown RBP20.12■□□□□ 0.81
CHFR-217ENST00000540537 MRGPREQ86SM8 312 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 LMNTD2Q8IXW0 634 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 NAT8LQ8N9F0 302 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 OR2Y1Q8NGV0 311 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 FAM136AQ96C01 138 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 ZNF285Q96NJ3 590 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 IL1RAPL1Q9NZN1 696 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 G3BP2Q9UN86 482 aaKnown RBP20.12■□□□□ 0.81
CHFR-217ENST00000540537 PTRH2Q9Y3E5 179 aaKnown RBP20.12■□□□□ 0.81
CHFR-217ENST00000540537 ZNF451Q9Y4E5 1061 aa20.12■□□□□ 0.81
CHFR-217ENST00000540537 A0A1B0GX78 115 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 A0A1W2PPV9 198 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 CTAGE9A4FU28 777 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 USP1O94782 785 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 ERGP11308 486 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 PSMB5P28074 263 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 OTX2P32243 289 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 SLC9A5Q14940 896 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 NAA25Q14CX7 972 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 ACSBG2Q5FVE4 666 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 PPIL6Q8IXY8 311 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 OR2L3Q8NG85 312 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 OR9A1PQ8NGU1 263 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 MIPEPQ99797 713 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 SELENOSQ9BQE4 189 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 FAM114A2Q9NRY5 505 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 KLHL42Q9P2K6 505 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 GALPQ9UBC7 116 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 TSR3Q9UJK0 312 aaKnown RBP20.11■□□□□ 0.81
CHFR-217ENST00000540537 SNX12Q9UMY4 172 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 FLNCQ14315 2725 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 PCSK5Q92824 1860 aa20.11■□□□□ 0.81
CHFR-217ENST00000540537 FITM1A5D6W6 292 aa20.1■□□□□ 0.81
CHFR-217ENST00000540537 KRT87PA6NCN2 255 aa20.1■□□□□ 0.81
CHFR-217ENST00000540537 ARHGEF33A8MVX0 844 aa20.1■□□□□ 0.81
CHFR-217ENST00000540537 MYO1CO00159 1063 aa20.1■□□□□ 0.81
CHFR-217ENST00000540537 DSCR3O14972 297 aa20.1■□□□□ 0.81
CHFR-217ENST00000540537 KIF5CO60282 957 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms