RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 NPRL3Q12980 569 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 ERAP2Q6P179 960 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 ATG16L2Q8NAA4 619 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 ANGPTL6Q8NI99 470 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 SUN5Q8TC36 379 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 PSMG2Q969U7 264 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 DMRTB1Q96MA1 342 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 SLC6A13Q9NSD5 602 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 TRMT6Q9UJA5 497 aaKnown RBP18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 TRAPPC4Q9Y296 219 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 AP3D1O14617 1153 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 CCNDBP1O95273 360 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 DNTTP04053 509 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 PIRTP0C851 137 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 GJA5P36382 358 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 P2RX3P56373 397 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 IL2P60568 153 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 PTPRNQ16849 979 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 SMU1Q2TAY7 513 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 GOLGA7Q7Z5G4 137 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 C11orf74Q86VG3 221 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 HORMAD1Q86X24 394 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 RAB43Q86YS6 212 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 PEX5LQ8IYB4 626 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 LINGO1Q96FE5 620 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 Q96MT0 163 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 OR2A14Q96R47 310 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 PHOX2BQ99453 314 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 GDF15Q99988 308 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 OR51E2Q9H255 320 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 RNF167Q9H6Y7 350 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 NUDT4Q9NZJ9 180 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 E9PQ18 207 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 CCRL2O00421 344 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 OR7A17O14581 309 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 CA12O43570 354 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 C19orf57Q0VDD7 668 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 GALNT3Q14435 633 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 PCBP2Q15366 365 aaKnown RBP eCLIP18.13■□□□□ 0.494e-7■□□□□ 9.2
SFSWAP-207ENST00000538548 SOWAHCQ53LP3 525 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 SIDT2Q8NBJ9 832 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 HCAR2Q8TDS4 363 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 EEF1AKMT1Q8WVE0 214 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 ELMO1Q92556 727 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 SEMA3CQ99985 751 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 CENPOQ9BU64 300 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 PLCXD1Q9NUJ7 323 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 CACNG4Q9UBN1 327 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 TNPO3Q9Y5L0 923 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 A0A1W2PQ67 120 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 RGS14O43566 566 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 TLL1O43897 1013 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 UGT2B17O75795 530 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 OTCP00480 354 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 EPOP01588 193 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 ITGA2P17301 1181 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 PCSK1P29120 753 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 ABHD18Q0P651 414 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 LRIF1Q5T3J3 769 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 CACHD1Q5VU97 1274 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 MLIPQ5VWP3 458 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 TCAIMQ8N3R3 496 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 LIX1Q8N485 282 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 KRTCAP2Q8N6L1 136 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 SCAMP5Q8TAC9 235 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 ZNF675Q8TD23 568 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 HRASLS5Q96KN8 279 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 SLC30A2Q9BRI3 323 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 TTYH2Q9BSA4 534 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 PLSCR3Q9NRY6 295 aa18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 SAMHD1Q9Y3Z3 626 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-207ENST00000538548 A0A0U1RQS6 177 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 WNT9AO14904 365 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 CDK1P06493 297 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 CAMK2GQ13555 558 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 TBRG1Q3YBR2 411 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 FAHD1Q6P587 224 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 AFTPHQ6ULP2 937 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 FLCNQ8NFG4 579 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 C1orf74Q96LT6 269 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 ZFP42Q96MM3 310 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 NLE1Q9NVX2 485 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 ERVK13-1Q9NX77 482 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 CFL2Q9Y281 166 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 PCDHGB2Q9Y5G2 931 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 PCDHGA6Q9Y5G7 932 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 HTTP42858 3142 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 HMX3A6NHT5 357 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 A8MV72 311 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 FABP3P05413 133 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 MYCLP1P12525 358 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 CA5AP35218 305 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 GTF2H2Q13888 395 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 YIF1BQ5BJH7 314 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 PIK3R6Q5UE93 754 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 FAM171A1Q5VUB5 890 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 GTF2H2CQ6P1K8 395 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 NEK5Q6P3R8 708 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 TMEM132CQ8N3T6 1108 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 ST13P5Q8NFI4 369 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms