RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SEMA6AQ9H2E6 1030 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 SPNS1Q9H2V7 528 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 RAD18Q9NS91 495 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 KLHL42Q9P2K6 505 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 CD300AQ9UGN4 299 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 TRPS1Q9UHF7 1281 aa13.72□□□□□ -0.21
ACTN1-205ENST00000538545 WDFY4Q6ZS81 3184 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 IFRD1O00458 451 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-205ENST00000538545 KPNA5O15131 536 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 NARSO43776 548 aaKnown RBP13.71□□□□□ -0.21
ACTN1-205ENST00000538545 GNPDA1P46926 289 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 TRIM25Q14258 630 aaKnown RBP13.71□□□□□ -0.21
ACTN1-205ENST00000538545 IZUMO2Q6UXV1 221 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 LRRC70Q7Z2Q7 622 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 DHDDSQ86SQ9 333 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 TMPRSS11BQ86T26 416 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 PCYOX1LQ8NBM8 494 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 DNAJC9Q8WXX5 260 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 MSLNLQ96KJ4 702 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 GPATCH1Q9BRR8 931 aaKnown RBP13.71□□□□□ -0.21
ACTN1-205ENST00000538545 SLC6A13Q9NSD5 602 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 ASF1AQ9Y294 204 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 MTCH2Q9Y6C9 303 aa13.71□□□□□ -0.21
ACTN1-205ENST00000538545 SNRNP200O75643 2136 aaKnown RBP13.71□□□□□ -0.21
ACTN1-205ENST00000538545 A0A1W2PQF6 199 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 C2CD4DB7Z1M9 353 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 H0Y8X5 98 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 RGS14O43566 566 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 CATP04040 527 aaKnown RBP13.71□□□□□ -0.22
ACTN1-205ENST00000538545 GBAP04062 536 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 ENO2P09104 434 aaPredicted RBP13.71□□□□□ -0.22
ACTN1-205ENST00000538545 ATP6V1B2P21281 511 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 TBPL1P62380 186 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 PPP2CBP62714 309 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 PPP2CAP67775 309 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 DPTQ07507 201 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 KIAA0040Q15053 153 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 TRIP10Q15642 601 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 FAM46CQ5VWP2 391 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 FRMD1Q8N878 549 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 ZNF740Q8NDX6 193 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 OSGEPL1Q9H4B0 414 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 PIAS3Q9Y6X2 628 aa13.71□□□□□ -0.22
ACTN1-205ENST00000538545 SAP18O00422 153 aaKnown RBP13.7□□□□□ -0.22
ACTN1-205ENST00000538545 AKAP10O43572 662 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 BCKDHAP12694 445 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 HOXB2P14652 356 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 CDKL1Q00532 357 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 SP140Q13342 867 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 GTF2H3Q13889 308 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 PDCD4Q53EL6 469 aaKnown RBP13.7□□□□□ -0.22
ACTN1-205ENST00000538545 ZFAND4Q86XD8 727 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 RASGRP3Q8IV61 690 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 KIAA1958Q8N8K9 716 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 SMRP1Q8NCR6 262 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 FBXL8Q96CD0 374 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 ANGPTL2Q9UKU9 493 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 KCNK6Q9Y257 313 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 DMDP11532 3685 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3DA0A087WVF3 549 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3IA0A087WXS9 549 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3EA0A087X179 549 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3KA0A087X1G2 549 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 A0A1W2PQU0 124 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3FA6NER0 549 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-205ENST00000538545 ZNF839A8K0R7 811 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3LB9A6J9 549 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 EIF3FO00303 357 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-205ENST00000538545 FKBP6O75344 327 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 BCAS2O75934 225 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-205ENST00000538545 GSNP06396 782 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3HP0C7X1 549 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 ACP5P13686 325 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 GRIA3P42263 894 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 HNMTP50135 292 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 AP1S2P56377 157 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 CLDN2P57739 230 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 PHC1P78364 1004 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 CDC16Q13042 620 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 ENPP2Q13822 863 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 SFT2D3Q587I9 215 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3GQ6DHY5 549 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3CQ6IPX1 549 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 ANKRD26P1Q6NSI1 321 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TRIM46Q7Z4K8 759 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 SPPL2CQ8IUH8 684 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 TBC1D3Q8IZP1 549 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-205ENST00000538545 AURKBQ96GD4 344 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-205ENST00000538545 NAF1Q96HR8 494 aaKnown RBP13.7□□□□□ -0.22
ACTN1-205ENST00000538545 ZDHHC5Q9C0B5 715 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 WDR37Q9Y2I8 494 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 HEATR5BQ9P2D3 2071 aa13.7□□□□□ -0.22
ACTN1-205ENST00000538545 RNASEH1O60930 286 aaKnown RBP13.69□□□□□ -0.22
ACTN1-205ENST00000538545 KRT6AP02538 564 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 KRT6BP04259 564 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 PCNAP12004 261 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 NTSR1P30989 418 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 EIF2DP41214 584 aaKnown RBP13.69□□□□□ -0.22
ACTN1-205ENST00000538545 KRT6CP48668 564 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms