RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 TFECO14948 347 aaPredicted RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 DCLK1O15075 740 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GSTA4O15217 222 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 SLC7A4O43246 635 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 MFSD11O43934 449 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 HUS1O60921 280 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 FAM20BO75063 409 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 MAFO75444 373 aaPredicted RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 CDK14O94921 469 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 EPN2O95208 641 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 MLYCDO95822 493 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 LGI1O95970 557 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 MT-ND2P03891 347 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 PFKMP08237 780 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 RPS17P08708 135 aaKnown RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 MTHFD1P11586 935 aaKnown RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 CKMT1AP12532 417 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 HNRNPLP14866 589 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP28-207ENST00000538475 RPL17P18621 184 aaKnown RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 HDCP19113 662 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 IGFBP5P24593 272 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 PTX3P26022 381 aaPredicted RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 MATKP42679 507 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 MAGEA2P43356 314 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 CCR10P46092 362 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GLRBP48167 497 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 SEPHS1P49903 392 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 OAZ1P54368 228 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GEMP55040 296 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 B2MP61769 119 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 NKX3-2P78367 333 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 RBP5P82980 135 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 IL5RAQ01344 420 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 LCP2Q13094 533 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 MAD2L1BPQ15013 274 aaPredicted RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 TAB1Q15750 504 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 PPP1R3AQ16821 1122 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 FAM187BQ17R55 369 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 UNC50Q53HI1 259 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 DALRD3Q5D0E6 543 aaKnown RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 XKR7Q5GH72 579 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 PITRM1Q5JRX3 1037 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 HABP4Q5JVS0 413 aaKnown RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 BSPRYQ5W0U4 402 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 FAM160B1Q5W0V3 765 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 ATG9BQ674R7 924 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 LRRC66Q68CR7 880 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 KDM4DQ6B0I6 523 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 SWSAP1Q6NVH7 229 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 DPY19L3Q6ZPD9 716 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GET4Q7L5D6 327 aaPredicted RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 UBE2Q1Q7Z7E8 422 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GPR149Q86SP6 731 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 RBM23Q86U06 439 aaKnown RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 ASPGQ86U10 573 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 CDH24Q86UP0 819 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 TRIM69Q86WT6 500 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 ZFAND4Q86XD8 727 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 KIF18BQ86Y91 864 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GPALPP1Q8IXQ4 340 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 SYTL1Q8IYJ3 562 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 FAM9CQ8IZT9 166 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 CARNMT1Q8N4J0 409 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GLB1L3Q8NCI6 653 aaPredicted RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 ZNF540Q8NDQ6 660 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 OR9I1Q8NGQ6 314 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 OR10Z1Q8NGY1 313 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 LRRC20Q8TCA0 184 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 RNF139Q8WU17 664 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 TWIST2Q8WVJ9 160 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GTF2H4Q92759 462 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 NT5C3BQ969T7 300 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 OMA1Q96E52 524 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 SLC47A1Q96FL8 570 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 PDXPQ96GD0 296 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 RADILQ96JH8 1075 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 TNIP3Q96KP6 325 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 CEP295NLQ96MC4 621 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 RPRD1AQ96P16 312 aaPredicted RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 COL21A1Q96P44 957 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 FCRL5Q96RD9 977 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 LGMNQ99538 433 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 C1QTNF7Q9BXJ2 289 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 NFKBIZQ9BYH8 718 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 B3GNT4Q9C0J1 378 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 C6orf62Q9GZU0 229 aaPredicted RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 TMEM168Q9H0V1 697 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 SMOC2Q9H3U7 446 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 FAM83DQ9H4H8 585 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 TFB2MQ9H5Q4 396 aaKnown RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 ACTR8Q9H981 624 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 AS3MTQ9HBK9 375 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 PTPRHQ9HD43 1115 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 HEBP1Q9NRV9 189 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 TREX1Q9NSU2 369 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GPATCH2LQ9NWQ4 482 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 ADPRHL2Q9NX46 363 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GLTPQ9NZD2 209 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 SEC14L4Q9UDX3 406 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 SRRDQ9UH36 339 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms