RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 MPP5Q8N3R9 675 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 ZADH2Q8N4Q0 377 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 TTC29Q8NA56 475 aaPredicted RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 UBE2Q2Q8WVN8 375 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 MENTQ9BUN1 341 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 EIF2B3Q9NR50 452 aaKnown RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 CHRAC1Q9NRG0 131 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 CUEDC1Q9NWM3 386 aaPredicted RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 MARCH4Q9P2E8 410 aaPredicted RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 PLEKHB1Q9UF11 243 aaPredicted RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 GNPTGQ9UJJ9 305 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 CDC23Q9UJX2 597 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 MRFAP1Q9Y605 127 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 ICE1Q9Y2F5 2266 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 ANKRD12Q6UB98 2062 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 RELNP78509 3460 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 COL12A1Q99715 3063 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 AGPSO00116 658 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 AP3B1O00203 1094 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 DSCR3O14972 297 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 NDUFS3O75489 264 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 FKBP9O95302 570 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 ZSCAN5DPP0CG00 497 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 MMP11P24347 488 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 RPL22P35268 128 aaKnown RBP9.29□□□□□ -0.92
CHD4-207ENST00000537634 GRIA3P42263 894 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 BDKRB1P46663 353 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 GCGRP47871 477 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 EIF3BP55884 814 aaKnown RBP9.29□□□□□ -0.92
CHD4-207ENST00000537634 CRADDP78560 199 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 AIMP2Q13155 320 aaKnown RBP9.29□□□□□ -0.92
CHD4-207ENST00000537634 GRB7Q14451 532 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 GRM7Q14831 915 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 NR6A1Q15406 480 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 RPS6KA1Q15418 735 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 EIF2S3LQ2VIR3 472 aaKnown RBP9.29□□□□□ -0.92
CHD4-207ENST00000537634 PLEKHN1Q494U1 663 aaPredicted RBP9.29□□□□□ -0.92
CHD4-207ENST00000537634 IRAK1BP1Q5VVH5 260 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 FIGLAQ6QHK4 219 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 IGFL3Q6UXB1 125 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 GSTA5Q7RTV2 222 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 OTOAQ7RTW8 1153 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 LRRC6Q86X45 466 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 LMNTD1Q8N9Z9 388 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 RAD51AP1Q96B01 352 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 NACC2Q96BF6 587 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 C19orf60Q96EN9 201 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 FOPNLQ96NB1 174 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 SELENOSQ9BQE4 189 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 IL22Q9GZX6 179 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 ZNF552Q9H707 407 aaPredicted RBP9.29□□□□□ -0.92
CHD4-207ENST00000537634 WDR54Q9H977 334 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 MRM3Q9HC36 420 aaKnown RBP9.29□□□□□ -0.92
CHD4-207ENST00000537634 SLC22A11Q9NSA0 550 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 CUTCQ9NTM9 273 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 BFARQ9NZS9 450 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 FBXL4Q9UKA2 621 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 NXT1Q9UKK6 140 aaKnown RBP9.29□□□□□ -0.92
CHD4-207ENST00000537634 TTC7AQ9ULT0 858 aaPredicted RBP9.29□□□□□ -0.92
CHD4-207ENST00000537634 FAM169AQ9Y6X4 670 aa9.29□□□□□ -0.92
CHD4-207ENST00000537634 MASP2O00187 686 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 PFDN6O15212 129 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 C1orf105O95561 183 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 ALBP02768 609 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 ITGAXP20702 1163 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 RPS3P23396 243 aaKnown RBP eCLIP9.28□□□□□ -0.92
CHD4-207ENST00000537634 MCM3P25205 808 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 PSMB5P28074 263 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 CCNFP41002 786 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 SOX8P57073 446 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 VSX2P58304 361 aaPredicted RBP9.28□□□□□ -0.92
CHD4-207ENST00000537634 ELOAQ14241 798 aaKnown RBP9.28□□□□□ -0.92
CHD4-207ENST00000537634 NAA25Q14CX7 972 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 CCNG2Q16589 344 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 NKG7Q16617 165 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 FAM214AQ32MH5 1076 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 PRAMEF13Q5VWM6 474 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 FCRL6Q6DN72 434 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 MRNIPQ6NTE8 343 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 CNSTQ6PJW8 725 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 C4orf22Q6V702 233 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 OVCH1Q7RTY7 1134 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 GAS2L3Q86XJ1 694 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 CISD2Q8N5K1 135 aaKnown RBP9.28□□□□□ -0.92
CHD4-207ENST00000537634 MAGEC3Q8TD91 643 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 ZUFSPQ96AP4 578 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 SNRNP40Q96DI7 357 aaKnown RBP9.28□□□□□ -0.92
CHD4-207ENST00000537634 VPS50Q96JG6 964 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 MIPEPQ99797 713 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 P2RY12Q9H244 342 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 SLC6A20Q9NP91 592 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 TREX1Q9NSU2 369 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 ASF1BQ9NVP2 202 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 IL1RAPL1Q9NZN1 696 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 CTSFQ9UBX1 484 aa9.28□□□□□ -0.92
CHD4-207ENST00000537634 TSR3Q9UJK0 312 aaKnown RBP9.28□□□□□ -0.92
CHD4-207ENST00000537634 RUVBL2Q9Y230 463 aaKnown RBP9.28□□□□□ -0.92
CHD4-207ENST00000537634 ZKSCAN5Q9Y2L8 839 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms