RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 AUP1Q9Y679 476 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 TCRBV5S2A0A599 114 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 KIAA0355O15063 1070 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 LRG1P02750 347 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 ANXA6P08133 673 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 SERPINF2P08697 491 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 GADD45AP24522 165 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 BRCC3P46736 316 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 INPP1P49441 399 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 ERVFC1P60507 584 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 ZNF273Q14593 569 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 TIGD6Q17RP2 521 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 COL28A1Q2UY09 1125 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 SLC27A1Q6PCB7 646 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 TEX261Q6UWH6 196 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 KIAA1324Q6UXG2 1013 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 CLEC14AQ86T13 490 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 DNAAF3Q8N9W5 541 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 MBOAT4Q96T53 435 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 MLPHQ9BV36 600 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 SMOC2Q9H3U7 446 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 MAGED2Q9UNF1 606 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 ABCG2Q9UNQ0 655 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 U3KQ87 197 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 CIB4A0PJX0 185 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 RECQL5O94762 991 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 PIK3CBP42338 1070 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 NOMO2Q5JPE7 1267 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 LHX8Q68G74 356 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 CAMKK1Q8N5S9 505 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 OR5T2Q8NGG2 359 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 MOCOSQ96EN8 888 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 XPR1Q9UBH6 696 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 ACOT9Q9Y305 439 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 GMPPBQ9Y5P6 360 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 MYL12BO14950 172 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 B3GAT3O94766 335 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 ECDO95905 644 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 TGM6O95932 706 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 MYL12AP19105 171 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 SLC6A2P23975 617 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 CDH13P55290 713 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 CAMK1Q14012 370 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 GPR19Q15760 415 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 CLLU1Q5K131 121 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 SULT1C3Q6IMI6 304 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 PTRH1Q86Y79 214 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 RBFAQ8N0V3 343 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 STYXQ8WUJ0 223 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 LENG9Q96B70 501 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 NIF3L1Q9GZT8 377 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 RIBC2Q9H4K1 309 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 SMURF1Q9HCE7 757 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 MRPL17Q9NRX2 175 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 BFARQ9NZS9 450 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 ELF5Q9UKW6 265 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 FKBP7Q9Y680 259 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 OR2A25A4D2G3 310 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 PAPSS2O95340 614 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 METTL18O95568 372 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 CDK1P06493 297 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 PCSK2P16519 638 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 JUNDP17535 347 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ADORA2BP29275 332 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 PUDPQ08623 228 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ASAH1Q13510 395 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 KCNC3Q14003 757 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ZNF169Q14929 603 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 DUSP6Q16828 381 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 FAM83EQ2M2I3 478 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 FBXO43Q4G163 708 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 FAM102AQ5T9C2 384 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 MAP4K3Q8IVH8 894 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 SCN4BQ8IWT1 228 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ZBTB45Q96K62 511 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 MRPL57Q9BQC6 102 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 DUSP21Q9H596 190 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 A0A1W2PPC1 479 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 CRCPO75575 148 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 LYPLA2O95372 231 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 CYBBP04839 570 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 SRCP12931 536 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 HNRNPLP14866 589 aaKnown RBP eCLIP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 CHRM3P20309 590 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ALAS2P22557 587 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ATP5F1P24539 256 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 NR2C2P49116 596 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 CSNK2BP67870 215 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 SLC35A2P78381 396 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ELP6Q0PNE2 266 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 COQ5Q5HYK3 327 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ZNF534Q76KX8 674 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 B3GNT8Q7Z7M8 397 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 RDH10Q8IZV5 341 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 C19orf18Q8NEA5 215 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 OR5K1Q8NHB7 308 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 MYDGFQ969H8 173 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 VPS39Q96JC1 886 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 NECTIN4Q96NY8 510 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 CHCHD6Q9BRQ6 235 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms