RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 OCIAD1Q9NX40 245 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 EPHA6Q9UF33 1036 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 ACSL5Q9ULC5 683 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 RIMKLBQ9ULI2 386 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 PSMD13Q9UNM6 376 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 ZNF148Q9UQR1 794 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 MYRFQ9Y2G1 1151 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 PPP2R2CQ9Y2T4 447 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 BSNQ9UPA5 3926 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 CCDC78A2IDD5 438 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 HEATR9A2RTY3 570 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 E7EVH7 732 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 TOX3O15405 576 aaPredicted RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 AKAP8O43823 692 aaKnown RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 GAS8O95995 478 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 FGGP02679 453 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 GSTM1P09488 218 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ZGLP1P0C6A0 271 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 SLC35G4P0C7Q5 338 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 PRSS56P0CW18 603 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ATP1B2P14415 290 aaPredicted RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 FOXN2P32314 431 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 LEPRP48357 1165 aaKnown RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 CDKN1CP49918 316 aaPredicted RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 SLC7A5Q01650 507 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 CACNG1Q06432 222 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 SRSF6Q13247 344 aaKnown RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 SNX1Q13596 522 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 LAMB3Q13751 1172 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ITIH4Q14624 930 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 CCNG2Q16589 344 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 SKIDA1Q1XH10 827 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ZNF658BQ4V348 819 aaPredicted RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 MANEAQ5SRI9 462 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 DCAF12Q5T6F0 453 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ANKS6Q68DC2 871 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 CAPRIN2Q6IMN6 1127 aaKnown RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 DUS1LQ6P1R4 473 aaKnown RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 KLHL35Q6PF15 583 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 VHLLQ6RSH7 139 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 PCSK4Q6UW60 755 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 C6orf15Q6UXA7 325 aaPredicted RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 CEACAM20Q6UY09 585 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 PPP1R21Q6ZMI0 780 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 SERPINA9Q86WD7 417 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 LILRA3Q8N6C8 439 aaPredicted RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 CCDC89Q8N998 374 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 DNAAF3Q8N9W5 541 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 GLIS1Q8NBF1 620 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.85□□□□□ -1.31
YBX3-206ENST00000536823 WBP1Q96G27 269 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ZDHHC12Q96GR4 267 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 CDKN2AIPNLQ96HQ2 116 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 C12orf66Q96MD2 445 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ZPBPQ9BS86 351 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 BDH2Q9BUT1 245 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ASPNQ9BXN1 380 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 RAB33BQ9H082 229 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 WWP1Q9H0M0 922 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ZNF768Q9H5H4 540 aaKnown RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 FAM96AQ9H5X1 160 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 KIR3DX1Q9H7L2 352 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 VPS37BQ9H9H4 285 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 EIF2B3Q9NR50 452 aaKnown RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 FBXO8Q9NRD0 319 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 IMP3Q9NV31 184 aaKnown RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 PAK5Q9P286 719 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 ZKSCAN5Q9Y2L8 839 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 HEBP2Q9Y5Z4 205 aa6.85□□□□□ -1.31
YBX3-206ENST00000536823 CFAP20Q9Y6A4 193 aaKnown RBP6.85□□□□□ -1.31
YBX3-206ENST00000536823 C17orf113A0A1B0GUU1 675 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 ZC3H12DA2A288 527 aaKnown RBP6.84□□□□□ -1.31
YBX3-206ENST00000536823 CCDC162PA2VCL2 907 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 TLCD2A6NGC4 264 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 OR51F1A6NGY5 319 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 EIF4E1BA6NMX2 242 aaKnown RBP6.84□□□□□ -1.31
YBX3-206ENST00000536823 PDPK1O15530 556 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 KIF1CO43896 1103 aaKnown RBP6.84□□□□□ -1.31
YBX3-206ENST00000536823 CEP104O60308 925 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 RAD1O60671 282 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 RASSF9O75901 435 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 STK17BO94768 372 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 AP2A2O94973 939 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 APRTP07741 180 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 ZSCAN5DPP0CG00 497 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 ETS1P14921 441 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 WT1P19544 449 aaPredicted RBP6.84□□□□□ -1.31
YBX3-206ENST00000536823 MSNP26038 577 aaKnown RBP6.84□□□□□ -1.31
YBX3-206ENST00000536823 NDUFS1P28331 727 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 RPL22P35268 128 aaKnown RBP6.84□□□□□ -1.31
YBX3-206ENST00000536823 GRIA1P42261 906 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 LMAN1P49257 510 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 PPP1CAP62136 330 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 RNF4P78317 190 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 ACVR1Q04771 509 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 RPA4Q13156 261 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 CCDC38Q502W7 563 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 ANKRD39Q53RE8 183 aa6.84□□□□□ -1.31
YBX3-206ENST00000536823 TAF1BQ53T94 588 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms