RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CYP2A13Q16696 494 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 TAF1BQ53T94 588 aaPredicted RBP12.67□□□□□ -0.38
PRKDC-206ENST00000536429 FAM69BQ5VUD6 431 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 CYB5D1Q6P9G0 228 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 TTC23LQ6PF05 361 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 PAQR3Q6TCH7 311 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 SUSD1Q6UWL2 747 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 ZDHHC24Q6UX98 284 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 KIAA0408Q6ZU52 694 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 NEK10Q6ZWH5 1172 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 ZSCAN1Q8NBB4 408 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 PPFIBP2Q8ND30 876 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 OR9A1PQ8NGU1 263 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 OR8K5Q8NH50 307 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 HMGCLL1Q8TB92 370 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 ASB11Q8WXH4 323 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 SLC39A7Q92504 469 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 ZNF592Q92610 1267 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 KIAA1143Q96AT1 154 aaPredicted RBP12.67□□□□□ -0.38
PRKDC-206ENST00000536429 OLFM1Q99784 485 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 MIPEPQ99797 713 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 CHST8Q9H2A9 424 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 FANCEQ9HB96 536 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 SAYSD1Q9NPB0 183 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 PCMTD2Q9NV79 361 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 MOCS1Q9NZB8 636 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 SPATA7Q9P0W8 599 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 TRMT6Q9UJA5 497 aaKnown RBP12.67□□□□□ -0.38
PRKDC-206ENST00000536429 ADAMTS6Q9UKP5 1117 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 PADI1Q9ULC6 663 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 PCDHB3Q9Y5E6 796 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 COMMD10Q9Y6G5 202 aa12.67□□□□□ -0.38
PRKDC-206ENST00000536429 ESYT3A0FGR9 886 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 ZNF891A8MT65 544 aaPredicted RBP12.66□□□□□ -0.38
PRKDC-206ENST00000536429 GFYI3L273 518 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 ZNF749O43361 778 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 KATNA1O75449 491 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 C1QL1O75973 258 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 FURINP09958 794 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 CCNYL3P0C7X3 344 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 MPC1LP0DKB6 136 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 TCN2P20062 427 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 CYP2A7P20853 494 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 PLTPP55058 493 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 ITGA1P56199 1179 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 RPS18P62269 152 aaKnown RBP12.66□□□□□ -0.38
PRKDC-206ENST00000536429 MGAT5Q09328 741 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 CALCOCO2Q13137 446 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 DNASE1L3Q13609 305 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 FRG1Q14331 258 aaKnown RBP12.66□□□□□ -0.38
PRKDC-206ENST00000536429 PTCHD3Q3KNS1 767 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 HECTD2Q5U5R9 776 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 C16orf46Q6P387 395 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 ZNF517Q6ZMY9 492 aaPredicted RBP12.66□□□□□ -0.38
PRKDC-206ENST00000536429 GALNT7Q86SF2 657 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 GPATCH11Q8N954 259 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 EXD3Q8N9H8 876 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 BBOF1Q8ND07 529 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 OR2A1Q8NGT9 310 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 EEF1AKMT1Q8WVE0 214 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 MR1Q95460 341 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 SLC22A18Q96BI1 424 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 ACAT2Q9BWD1 397 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 RAB11FIP5Q9BXF6 653 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 CHRNA10Q9GZZ6 450 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 ACTR5Q9H9F9 607 aaPredicted RBP12.66□□□□□ -0.38
PRKDC-206ENST00000536429 SYTL2Q9HCH5 934 aa12.66□□□□□ -0.38
PRKDC-206ENST00000536429 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.66□□□□□ -0.38
PRKDC-206ENST00000536429 SPENQ96T58 3664 aaKnown RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 CXorf49A8MYA2 514 aaPredicted RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 E7EQ34 232 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 MEN1O00255 615 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 MAP3K7O43318 606 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 CTSVO60911 334 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 TSPAN12O95859 305 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 SLC16A8O95907 504 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 SYF2O95926 243 aaKnown RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 MT-ND3P03897 115 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 CATP04040 527 aaKnown RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 CBSLP0DN79 551 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 ENO3P13929 434 aaPredicted RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 FDXRP22570 491 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 SSTR1P30872 391 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 CBSP35520 551 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 PNLIPRP1P54315 467 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 NFKB2Q00653 900 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 CDC20Q12834 499 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 ZNF460Q14592 562 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 FIGLAQ6QHK4 219 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 TMEM207Q6UWW9 146 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 MBOAT1Q6ZNC8 495 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 UBE2R2Q712K3 238 aaPredicted RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 STRA8Q7Z7C7 330 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 MCATQ8IVS2 390 aaKnown RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 LRRC56Q8IYG6 542 aaPredicted RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 DSELQ8IZU8 1212 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 ZNF655Q8N720 491 aaPredicted RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 OR2L3Q8NG85 312 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 FBXO25Q8TCJ0 367 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms