RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 GP1BBP13224 206 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 PAMP19021 973 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 TPSB2P20231 275 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 ALAS2P22557 587 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 GRM7Q14831 915 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 MYBPC3Q14896 1274 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 TPSAB1Q15661 275 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 DCAF10Q5QP82 559 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 FHL5Q5TD97 284 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 MRPL14Q6P1L8 145 aaKnown RBP12.61□□□□□ -0.39
RTN3-207ENST00000536011 ZNF662Q6ZS27 426 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 PRUNE1Q86TP1 453 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 MCATQ8IVS2 390 aaKnown RBP12.61□□□□□ -0.39
RTN3-207ENST00000536011 KRT222Q8N1A0 295 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 GALNT16Q8N428 558 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 TTC29Q8NA56 475 aaPredicted RBP12.61□□□□□ -0.39
RTN3-207ENST00000536011 LINC01555Q8NAE3 123 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 LKAAEAR1Q8TD35 194 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 ZUFSPQ96AP4 578 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 TCF12Q99081 682 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 MENTQ9BUN1 341 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 P2RY12Q9H244 342 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 WDR54Q9H977 334 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 IL1RAPL1Q9NZN1 696 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 MARCH4Q9P2E8 410 aaPredicted RBP12.61□□□□□ -0.39
RTN3-207ENST00000536011 NXT1Q9UKK6 140 aaKnown RBP12.61□□□□□ -0.39
RTN3-207ENST00000536011 TTC7AQ9ULT0 858 aaPredicted RBP12.61□□□□□ -0.39
RTN3-207ENST00000536011 MAP4K5Q9Y4K4 846 aa12.61□□□□□ -0.39
RTN3-207ENST00000536011 TNRC6AQ8NDV7 1962 aaKnown RBP12.61□□□□□ -0.39
RTN3-207ENST00000536011 SPTAN1Q13813 2472 aaKnown RBP12.61□□□□□ -0.39
RTN3-207ENST00000536011 MED13Q9UHV7 2174 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 DSCR3O14972 297 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 HCRTR1O43613 425 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 AGFG2O95081 481 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 ALBP02768 609 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 ESR1P03372 595 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 ITGAXP20702 1163 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 ATP5DP30049 168 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 EIF3BP55884 814 aaKnown RBP12.6□□□□□ -0.39
RTN3-207ENST00000536011 CRADDP78560 199 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 SLC9A5Q14940 896 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 SIX1Q15475 284 aaPredicted RBP12.6□□□□□ -0.39
RTN3-207ENST00000536011 INPP5JQ15735 1006 aaPredicted RBP12.6□□□□□ -0.39
RTN3-207ENST00000536011 FAM214AQ32MH5 1076 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 IRAK1BP1Q5VVH5 260 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 SLC6A19Q695T7 634 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 LRRC8BQ6P9F7 803 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 FIGLAQ6QHK4 219 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 TTLL10Q6ZVT0 673 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 LDB1Q86U70 411 aaPredicted RBP12.6□□□□□ -0.39
RTN3-207ENST00000536011 TAX1BP1Q86VP1 789 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 IQCKQ8N0W5 287 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 LMNTD1Q8N9Z9 388 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 HMGCLL1Q8TB92 370 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 SELENOSQ9BQE4 189 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 KIFC1Q9BW19 673 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 LRRC4CQ9HCJ2 640 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 LZTFL1Q9NQ48 299 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 FAM114A2Q9NRY5 505 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 P4HTMQ9NXG6 502 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 SPATA7Q9P0W8 599 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 MAP10Q9P2G4 905 aa12.6□□□□□ -0.39
RTN3-207ENST00000536011 AGPSO00116 658 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 SNPHO15079 494 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 SRPX2O60687 465 aaPredicted RBP12.59□□□□□ -0.39
RTN3-207ENST00000536011 VAPBO95292 243 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 MMP11P24347 488 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 MGAT1P26572 445 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 NMBRP28336 390 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 ADARP55265 1226 aaKnown RBP12.59□□□□□ -0.39
RTN3-207ENST00000536011 AIMP2Q13155 320 aaKnown RBP12.59□□□□□ -0.39
RTN3-207ENST00000536011 RAPSNQ13702 412 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 GRB7Q14451 532 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 OVCH1Q7RTY7 1134 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 PPP1R32Q7Z5V6 425 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 C2orf73Q8N5S3 287 aaPredicted RBP12.59□□□□□ -0.39
RTN3-207ENST00000536011 IL17FQ96PD4 163 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 ILKAPQ9H0C8 392 aaPredicted RBP12.59□□□□□ -0.39
RTN3-207ENST00000536011 ATP13A2Q9NQ11 1180 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 ENAMQ9NRM1 1142 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 CUTCQ9NTM9 273 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 B3GNT3Q9Y2A9 372 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 KLHL20Q9Y2M5 609 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 KLK4Q9Y5K2 254 aa12.59□□□□□ -0.39
RTN3-207ENST00000536011 SPTBN1Q01082 2364 aaKnown RBP12.58□□□□□ -0.4
RTN3-207ENST00000536011 SNRNP200O75643 2136 aaKnown RBP12.58□□□□□ -0.4
RTN3-207ENST00000536011 ZNF839A8K0R7 811 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 E5RI56 91 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 CEP104O60308 925 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 PHF2O75151 1096 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 C1orf105O95561 183 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 ONECUT2O95948 504 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 CTSBP07858 339 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 ERVK-10P10266 1014 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 OGNP20774 298 aaKnown RBP12.58□□□□□ -0.4
RTN3-207ENST00000536011 GNLYP22749 145 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 GCGRP47871 477 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 UQCRFS1P47985 274 aa12.58□□□□□ -0.4
RTN3-207ENST00000536011 SOX8P57073 446 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms