RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 GFPT2O94808 682 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 SMIM10L2AP0DMW4 78 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 SMIM10L2BP0DMW5 78 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 PCP11498 1178 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 PORP16435 677 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 ANXA7P20073 488 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 EEF1DP29692 281 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 EIF2DP41214 584 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 MSH2P43246 934 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 SLC15A1P46059 708 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 GPR143P51810 404 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 EFNA5P52803 228 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 ART1P52961 327 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 PMS2P54278 862 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 PNLIPRP2P54317 469 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 NLRP5P59047 1200 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 STARD6P59095 220 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 ABATP80404 500 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 CSTF1Q05048 431 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 HNF4GQ14541 408 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 PTPN14Q15678 1187 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 CCDC96Q2M329 555 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 ALG11Q2TAA5 492 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 LETM2Q2VYF4 491 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 MMEL1Q495T6 779 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 PMS2CLQ68D20 193 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 DUS1LQ6P1R4 473 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 DCLRE1AQ6PJP8 1040 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 TMCO3Q6UWJ1 677 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 B3GNT6Q6ZMB0 384 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 SZRD1Q7Z422 152 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 HAPLN4Q86UW8 402 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 AACSQ86V21 672 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 GLCCI1Q86VQ1 547 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 DNAAF5Q86Y56 855 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 ZDHHC17Q8IUH5 632 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 GCSAMQ8N6F7 178 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 ZBTB44Q8NCP5 570 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 GPT2Q8TD30 523 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 ZNF653Q96CK0 615 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 MED30Q96HR3 178 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 CDHR1Q96JP9 859 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 MARK4Q96L34 752 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 ZNF558Q96NG5 402 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 OR2A14Q96R47 310 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 CTAGE1Q96RT6 745 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 MTERF1Q99551 399 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 C1QTNF5Q9BXJ0 243 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 RTN4RQ9BZR6 473 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 LRRCC1Q9C099 1032 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 POMKQ9H5K3 350 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 DENND2DQ9H6A0 471 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 CHMP1AQ9HD42 196 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 CD93Q9NPY3 652 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 TCP11L1Q9NUJ3 509 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 ZNF224Q9NZL3 707 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 IL17BQ9UHF5 180 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 DDX25Q9UHL0 483 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 NME7Q9Y5B8 376 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 SETXQ7Z333 2677 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 GPR179Q6PRD1 2367 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 ZBED9Q6R2W3 1325 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 CCDC171Q6TFL3 1326 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 PCNX2A6NKB5 2137 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 FRYQ5TBA9 3013 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 A0A1W2PQF6 199 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 A6NL46 340 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 CTDSP2O14595 271 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 TIMM23O14925 209 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 SLC16A5O15375 505 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 PRKAB2O43741 272 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 RANBP6O60518 1105 aaKnown RBP3.2□□□□□ -1.9
SNHG1-202ENST00000535689 TPPPO94811 219 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 OR2C1O95371 312 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 GGPS1O95749 300 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 CHRNA1P02708 482 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 GHRP10912 638 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 TOP1P11387 765 aaKnown RBP3.2□□□□□ -1.9
SNHG1-202ENST00000535689 NR2F2P24468 414 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 DNAJB1P25685 340 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 CCND2P30279 289 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 HOXC8P31273 242 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 CA8P35219 290 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 PIGAP37287 484 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 RPS9P46781 194 aaKnown RBP3.2□□□□□ -1.9
SNHG1-202ENST00000535689 LIG4P49917 911 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 SIRPAP78324 504 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 ZXDBP98169 803 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 CEBPZQ03701 1054 aaKnown RBP3.2□□□□□ -1.9
SNHG1-202ENST00000535689 TROAPQ12815 778 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 GAGE5Q13069 117 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 GAGE6Q13070 117 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 NR1D2Q14995 579 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 C2orf68Q2NKX9 166 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 KCNT1Q5JUK3 1230 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 SPECC1Q5M775 1068 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 LRCH2Q5VUJ6 765 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 PLPP4Q5VZY2 271 aa3.2□□□□□ -1.9
SNHG1-202ENST00000535689 NADSYN1Q6IA69 706 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms