RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 WISP3O95389 354 aaPredicted RBP21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 LIPCP11150 499 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 ITPKBP27987 946 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 OAS2P29728 719 aaKnown RBP21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 HSD17B2P37059 387 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 PNLIPRP1P54315 467 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 TUBB4BP68371 445 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 SP140Q13342 867 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 TGIF1Q15583 401 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 GPR19Q15760 415 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 CYB5D1Q6P9G0 228 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 LRRC69Q6ZNQ3 347 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 PPP1R3BQ86XI6 285 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 ZNF480Q8WV37 535 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 ZNF501Q96CX3 271 aaPredicted RBP21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 CHRNA10Q9GZZ6 450 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 CAB39LQ9H9S4 337 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 PARVBQ9HBI1 364 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 POPDC3Q9HBV1 291 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 FAM60AQ9NP50 221 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 PILRAQ9UKJ1 303 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 IKZF3Q9UKT9 509 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 SSUH2Q9Y2M2 353 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 KLK10O43240 276 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 STK17BO94768 372 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 TIAF1O95411 115 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 ACSL3O95573 720 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 SYF2O95926 243 aaKnown RBP21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 MSL3P1P0C860 447 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 ZNF28P17035 718 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 PSMB5P28074 263 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 PHBP35232 272 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 SPRP35270 261 aaPredicted RBP21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 TLE3Q04726 772 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 USP10Q14694 798 aaKnown RBP21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 PHKG1Q16816 387 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 TEX35Q5T0J7 233 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 CDHR3Q6ZTQ4 885 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 BPHLQ86WA6 291 aaPredicted RBP21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 NKAPQ8N5F7 415 aaKnown RBP21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 OR2A1Q8NGT9 310 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 MCOLN3Q8TDD5 553 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 ANKRD49Q8WVL7 239 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 SMPDL3AQ92484 453 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 TCTN2Q96GX1 697 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 ACSS3Q9H6R3 686 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 KLHL20Q9Y2M5 609 aa21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 TMEM184BQ9Y519 407 aaPredicted RBP21.9■■□□□ 1.1
SFSWAP-204ENST00000535399 E7ENX8 843 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 FKBP9O95302 570 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 DLGAP3O95886 979 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 CYP2A7P20853 494 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 MAGP20916 626 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 GABRA4P48169 554 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 TAP2Q03519 686 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 SF1Q15637 639 aaKnown RBP21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 KIAA1614Q5VZ46 1190 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 PWWP2BQ6NUJ5 590 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 LRRC56Q8IYG6 542 aaPredicted RBP21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 OR8K5Q8NH50 307 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 RNF31Q96EP0 1072 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 FCRL4Q96PJ5 515 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 CYTH2Q99418 400 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 MIPEPQ99797 713 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 SYTL2Q9HCH5 934 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 ZFHX4Q86UP3 3567 aa21.89■■□□□ 1.09
SFSWAP-204ENST00000535399 ADAMTS20P59510 1910 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 ZNF839A8K0R7 811 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 MAP3K7O43318 606 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 RAD1O60671 282 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 IMPA1P29218 277 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 SLC12A2P55011 1212 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 SLMAPQ14BN4 828 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 ZKSCAN8Q15776 578 aaPredicted RBP21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 SUSD1Q6UWL2 747 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 MBOAT1Q6ZNC8 495 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 TIPARPQ7Z3E1 657 aaKnown RBP21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 DNAJC22Q8N4W6 341 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 PPFIBP2Q8ND30 876 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 OR2L3Q8NG85 312 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 HNRNPLLQ8WVV9 542 aaKnown RBP21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 ANKRD7Q92527 254 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 NKD1Q969G9 470 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 TSPAN17Q96FV3 270 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 CCDC138Q96M89 665 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 ULBP3Q9BZM4 244 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 GPAMQ9HCL2 828 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 STOX2Q9P2F5 926 aaPredicted RBP21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 KLK4Q9Y5K2 254 aa21.88■■□□□ 1.09
SFSWAP-204ENST00000535399 SDK2Q58EX2 2172 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 PHGDHO43175 533 aaKnown RBP21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 HCRTR1O43613 425 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 KIAA0754O94854 1291 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 FAM153BP0C7A2 387 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 GRIA3P42263 894 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 YBX1P67809 324 aaKnown RBP21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 FAM153CQ494X1 144 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 FCRL6Q6DN72 434 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms