RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	NAP1L3	Q99457	506 aa	Predicted RBP	11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	NRTN	Q99748	197 aa		11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	SPOCK3	Q9BQ16	436 aa		11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	ENAM	Q9NRM1	1142 aa		11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	P4HTM	Q9NXG6	502 aa		11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	OR6C2	Q9NZP2	312 aa		11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	POLG2	Q9UHN1	485 aa		11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	TSR3	Q9UJK0	312 aa	Known RBP	11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	SRPK3	Q9UPE1	567 aa		11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	ICK	Q9UPZ9	632 aa		11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	SPEN	Q96T58	3664 aa	Known RBP	11.13	□□□□□ -0.63
CTNND1-238	ENST00000534647	PCSK5	Q92824	1860 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	ANKUB1	A6NFN9	424 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	PGRMC1	O00264	195 aa	Known RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	QSOX1	O00391	747 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	CDK2AP1	O14519	115 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	TUBB	P07437	444 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	TPBGL	P0DKB5	382 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	UGT2B7	P16662	529 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	MCM3	P25205	808 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	CTNNA2	P26232	953 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	PSMB4	P28070	264 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	OTX2	P32243	289 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	MC4R	P32245	332 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	MARCKSL1	P49006	195 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	PLOD1	Q02809	727 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	PRKG2	Q13237	762 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	ZIC1	Q15915	447 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	SLC5A12	Q1EHB4	618 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	NKAIN1	Q4KMZ8	207 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	MLIP	Q5VWP3	458 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	IGFL2	Q6UWQ7	119 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	UNC5A	Q6ZN44	842 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	HOOK3	Q86VS8	718 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	SERPINA9	Q86WD7	417 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	CCDC50	Q8IVM0	306 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	TBC1D21	Q8IYX1	336 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	ALDH16A1	Q8IZ83	802 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	SLC34A3	Q8N130	599 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	DNAJC22	Q8N4W6	341 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	ACTL9	Q8TC94	416 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	N4BP2L2	Q92802	583 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	INPP5D	Q92835	1189 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	LRRC45	Q96CN5	670 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	C5orf34	Q96MH7	638 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	SPATA13	Q96N96	652 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	RANBP9	Q96S59	729 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	TBL1Y	Q9BQ87	522 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	APOL2	Q9BQE5	337 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	HEMGN	Q9BXL5	484 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	SPRTN	Q9H040	489 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	FAM96A	Q9H5X1	160 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	XKR8	Q9H6D3	395 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	C10orf88	Q9H8K7	445 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	ATP13A2	Q9NQ11	1180 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	NLE1	Q9NVX2	485 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	IFT80	Q9P2H3	777 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	GPN3	Q9UHW5	284 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	PTRH2	Q9Y3E5	179 aa	Known RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	COPG1	Q9Y678	874 aa	Known RBP	11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	POLE	Q07864	2286 aa		11.12	□□□□□ -0.63
CTNND1-238	ENST00000534647	SERTM1	A2A2V5	107 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	AGPS	O00116	658 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	ZSCAN9	O15535	394 aa	Predicted RBP	11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	HCRTR1	O43613	425 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	CNOT3	O75175	753 aa	Known RBP	11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	AP2A1	O95782	977 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	UMOD	P07911	640 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	CHRM5	P08912	532 aa	Predicted RBP	11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	RHOXF2B	P0C7M4	288 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	RBP3	P10745	1247 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	NSG1	P42857	185 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	CDKN1C	P49918	316 aa	Predicted RBP	11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	RWDD2B	P57060	319 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	OTUD4	Q01804	1114 aa	Known RBP	11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	CACNG1	Q06432	222 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	C2orf54	Q08AI8	447 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	AIMP2	Q13155	320 aa	Known RBP	11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	OLIG2	Q13516	323 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	PWP1	Q13610	501 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	RAPSN	Q13702	412 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	KCTD11	Q693B1	232 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	ZNF787	Q6DD87	383 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	PPP1R32	Q7Z5V6	425 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	MMGT1	Q8N4V1	131 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	CLDN19	Q8N6F1	224 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	ST6GALNAC3	Q8NDV1	305 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	SPATA4	Q8NEY3	305 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	OR5K2	Q8NHB8	316 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	ACTRT1	Q8TDG2	376 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	DENND1A	Q8TEH3	1009 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	ANKRD7	Q92527	254 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	KRT35	Q92764	455 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	CDKN2AIPNL	Q96HQ2	116 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	MS4A14	Q96JA4	679 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	EAF1	Q96JC9	268 aa	Predicted RBP	11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	RHOXF2	Q9BQY4	288 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	HGH1	Q9BTY7	390 aa		11.11	□□□□□ -0.63
CTNND1-238	ENST00000534647	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms