RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SLC6A20Q9NP91 592 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 STOX2Q9P2F5 926 aaPredicted RBP13.53□□□□□ -0.24
VPS11-205ENST00000534551 ZMIZ1Q9ULJ6 1067 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 SH2B3Q9UQQ2 575 aa13.53□□□□□ -0.24
VPS11-205ENST00000534551 A0A087WUV0 522 aaPredicted RBP13.52□□□□□ -0.25
VPS11-205ENST00000534551 TEX51A0A1B0GUA7 166 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 B4E171 279 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 MATN2O00339 956 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 ZBTB14O43829 449 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 PRICKLE3O43900 615 aaPredicted RBP13.52□□□□□ -0.25
VPS11-205ENST00000534551 ZBTB11O95625 1053 aaPredicted RBP13.52□□□□□ -0.25
VPS11-205ENST00000534551 GUCA1CO95843 209 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 C8GP07360 202 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 ABHD2P08910 425 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 SLC35E2BP0CK96 405 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 STMN1P16949 149 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 SPRP35270 261 aaPredicted RBP13.52□□□□□ -0.25
VPS11-205ENST00000534551 TSPAN7P41732 249 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 MLLT3P42568 568 aaPredicted RBP13.52□□□□□ -0.25
VPS11-205ENST00000534551 PNLIPRP1P54315 467 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 RAB10P61026 200 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 TBPL1P62380 186 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 MC2RQ01718 297 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 DLG1Q12959 904 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 SP140Q13342 867 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 TUBB3Q13509 450 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 CSHL1Q14406 222 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 KIR2DS3Q14952 304 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 TGIF1Q15583 401 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 OR4D1Q15615 310 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 PPP1R3AQ16821 1122 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 ST3GAL2Q16842 350 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 ZXDCQ2QGD7 858 aaPredicted RBP13.52□□□□□ -0.25
VPS11-205ENST00000534551 PRAMEF17Q5VTA0 474 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 IGF2-ASQ6U949 168 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 CDHR3Q6ZTQ4 885 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 LRRC56Q8IYG6 542 aaPredicted RBP13.52□□□□□ -0.25
VPS11-205ENST00000534551 SYTL1Q8IYJ3 562 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 KDF1Q8NAX2 398 aaPredicted RBP13.52□□□□□ -0.25
VPS11-205ENST00000534551 MAGEC3Q8TD91 643 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 DCAKDQ8WVC6 231 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 EXT2Q93063 718 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 PTERQ96BW5 349 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 SLC12A9Q9BXP2 914 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 TSPYL1Q9H0U9 437 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 SNX15Q9NRS6 342 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 C1GALT1Q9NS00 363 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 THSD1Q9NS62 852 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 DKK4Q9UBT3 224 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 CTNNAL1Q9UBT7 734 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 TAC3Q9UHF0 121 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 BTRCQ9Y297 605 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 URB1O60287 2271 aaKnown RBP13.52□□□□□ -0.25
VPS11-205ENST00000534551 LAMA5O15230 3695 aa13.52□□□□□ -0.25
VPS11-205ENST00000534551 EXOC1LA0A1B0GW35 172 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 TOX3O15405 576 aaPredicted RBP13.51□□□□□ -0.25
VPS11-205ENST00000534551 KDM1AO60341 852 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 ALDOAP04075 364 aaKnown RBP13.51□□□□□ -0.25
VPS11-205ENST00000534551 SHBGP04278 402 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 INHBAP08476 426 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 CD1DP15813 335 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 CYP2A7P20853 494 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 OAS2P29728 719 aaKnown RBP13.51□□□□□ -0.25
VPS11-205ENST00000534551 ARL4DP49703 201 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 HSD11B2P80365 405 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 C18orf21Q32NC0 220 aaPredicted RBP13.51□□□□□ -0.25
VPS11-205ENST00000534551 LRRC8EQ6NSJ5 796 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 RAPH1Q70E73 1250 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 TRMT10CQ7L0Y3 403 aaKnown RBP13.51□□□□□ -0.25
VPS11-205ENST00000534551 D2HGDHQ8N465 521 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 FBXO15Q8NCQ5 510 aaPredicted RBP13.51□□□□□ -0.25
VPS11-205ENST00000534551 OR2L3Q8NG85 312 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 OR2A1Q8NGT9 310 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 SNIP1Q8TAD8 396 aaKnown RBP13.51□□□□□ -0.25
VPS11-205ENST00000534551 HMGCLL1Q8TB92 370 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 KCTD4Q8WVF5 259 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 UBLCP1Q8WVY7 318 aaPredicted RBP13.51□□□□□ -0.25
VPS11-205ENST00000534551 ALKBH8Q96BT7 664 aaKnown RBP13.51□□□□□ -0.25
VPS11-205ENST00000534551 TSPAN17Q96FV3 270 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 FCRL4Q96PJ5 515 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 TAAR9Q96RI9 348 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 ATG10Q9H0Y0 220 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 SYNPO2LQ9H987 977 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 PARVBQ9HBI1 364 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 POPDC3Q9HBV1 291 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 WDR70Q9NW82 654 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 CCDC88CQ9P219 2028 aa13.51□□□□□ -0.25
VPS11-205ENST00000534551 IGKV1-8A0A0C4DH67 115 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 TMEM150CB9EJG8 249 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 E7ENX8 843 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 CCDC166P0CW27 439 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 CSRP3P50461 194 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 PCBP4P57723 403 aaKnown RBP13.5□□□□□ -0.25
VPS11-205ENST00000534551 ERVPABLB-1P60509 514 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 TAP2Q03519 686 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 SLC29A2Q14542 456 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 SF1Q15637 639 aaKnown RBP13.5□□□□□ -0.25
VPS11-205ENST00000534551 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 FBXO48Q5FWF7 155 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 FCRL6Q6DN72 434 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms