RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 GPN3Q9UHW5 284 aaPredicted RBP16.58■□□□□ 0.24
PHRF1-204ENST00000532550 TCFL5Q9UL49 500 aa16.58■□□□□ 0.24
PHRF1-204ENST00000532550 SAR1BQ9Y6B6 198 aa16.58■□□□□ 0.24
PHRF1-204ENST00000532550 H3BMH7 237 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 PRICKLE3O43900 615 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-204ENST00000532550 RFPL1O75677 317 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 CAPN1P07384 714 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 CD63P08962 238 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 CBSLP0DN79 551 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 PGAM1P18669 254 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 CBSP35520 551 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 GRIA3P42263 894 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 CLCN7P51798 805 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 DCDP81605 110 aaKnown RBP16.57■□□□□ 0.24
PHRF1-204ENST00000532550 HSP90AA5PQ58FG0 334 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 C1orf189Q5VU69 101 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 MLIPQ5VWP3 458 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 RHBDD2Q6NTF9 364 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 APLFQ8IW19 511 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-204ENST00000532550 KLHL7Q8IXQ5 586 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 OR9A1PQ8NGU1 263 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 HMGCLL1Q8TB92 370 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 RUNDC3BQ96NL0 473 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 NAPGQ99747 312 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-204ENST00000532550 IARS2Q9NSE4 1012 aaKnown RBP16.57■□□□□ 0.24
PHRF1-204ENST00000532550 SPATA7Q9P0W8 599 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 KLHL42Q9P2K6 505 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 TLK1Q9UKI8 766 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 FBXO5Q9UKT4 447 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 SRPK3Q9UPE1 567 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 PADI2Q9Y2J8 665 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 COMMD10Q9Y6G5 202 aa16.57■□□□□ 0.24
PHRF1-204ENST00000532550 TARM1B6A8C7 271 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 HAUS5O94927 633 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 TTC4O95801 387 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 CATP04040 527 aaKnown RBP16.56■□□□□ 0.24
PHRF1-204ENST00000532550 CTSBP07858 339 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 ALAS2P22557 587 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 SLC1A2P43004 574 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 PAFAH1B1P43034 410 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 PTGIRP43119 386 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 PMS2P54278 862 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 DHX9Q08211 1270 aaKnown RBP16.56■□□□□ 0.24
PHRF1-204ENST00000532550 IL10RAQ13651 578 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 NCF4Q15080 339 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 LACTB2Q53H82 288 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-204ENST00000532550 ZNF385CQ66K41 422 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-204ENST00000532550 FCRL6Q6DN72 434 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 FAM198BQ6UWH4 519 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 SYDE1Q6ZW31 735 aaPredicted RBP16.56■□□□□ 0.24
PHRF1-204ENST00000532550 NEK10Q6ZWH5 1172 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 KCNMB4Q86W47 210 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 CREG2Q8IUH2 290 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 PROKR1Q8TCW9 393 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 DENND1AQ8TEH3 1009 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 DLG3Q92796 817 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 KCNJ9Q92806 393 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 INPP5DQ92835 1189 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 EBNA1BP2Q99848 306 aaKnown RBP16.56■□□□□ 0.24
PHRF1-204ENST00000532550 FAM167BQ9BTA0 163 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 NAT9Q9BTE0 207 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 DHRS4Q9BTZ2 278 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 FAM114A2Q9NRY5 505 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 DHCR7Q9UBM7 475 aaKnown RBP16.56■□□□□ 0.24
PHRF1-204ENST00000532550 DHRS7Q9Y394 339 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 CCDC88CQ9P219 2028 aa16.56■□□□□ 0.24
PHRF1-204ENST00000532550 KRT87PA6NCN2 255 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 ARGFXA6NJG6 315 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 PSIP1O75475 530 aaKnown RBP16.55■□□□□ 0.24
PHRF1-204ENST00000532550 F7P08709 466 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-204ENST00000532550 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 ARSFP54793 590 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 DR1Q01658 176 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 CYP2A13Q16696 494 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 BBS9Q3SYG4 887 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 TCTE1Q5JU00 501 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 TCTN3Q6NUS6 607 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 ZNF549Q6P9A3 640 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 PDIK1LQ8N165 341 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 GBP5Q96PP8 586 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 MIPEPQ99797 713 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 ACSS2Q9NR19 701 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 IFT80Q9P2H3 777 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-204ENST00000532550 NDOR1Q9UHB4 597 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 ANAPC2Q9UJX6 822 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 MED13Q9UHV7 2174 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 BSNQ9UPA5 3926 aa16.55■□□□□ 0.24
PHRF1-204ENST00000532550 ANKRD12Q6UB98 2062 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 ARHGEF33A8MVX0 844 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 ZBTB14O43829 449 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 SRPX2O60687 465 aaPredicted RBP16.54■□□□□ 0.24
PHRF1-204ENST00000532550 VPS26AO75436 327 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 MPC1LP0DKB6 136 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 ERVK-10P10266 1014 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 ENO3P13929 434 aaPredicted RBP16.54■□□□□ 0.24
PHRF1-204ENST00000532550 CMPK1P30085 196 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 HSD17B2P37059 387 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 CCL11P51671 97 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 MPP1Q00013 466 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 CUL1Q13616 776 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms