RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 HCN4Q9Y3Q4 1203 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 RNF215Q9Y6U7 377 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 FRYLO94915 3013 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 ASCC3Q8N3C0 2202 aaKnown RBP18.44■□□□□ 0.54
SMPD1-205ENST00000531303 ZNF839A8K0R7 811 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 LYPLA1O75608 230 aaPredicted RBP18.44■□□□□ 0.54
SMPD1-205ENST00000531303 RPS17P08708 135 aaKnown RBP18.44■□□□□ 0.54
SMPD1-205ENST00000531303 TYRP1P17643 537 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 SHMT2P34897 504 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 GGT5P36269 586 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 HSD17B2P37059 387 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 FASLGP48023 281 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 SLC6A12P48065 614 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 BST1Q10588 318 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 ARHGAP19Q14CB8 494 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 CSRP2Q16527 193 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 CAPN13Q6MZZ7 669 aaPredicted RBP18.44■□□□□ 0.54
SMPD1-205ENST00000531303 THOC6Q86W42 341 aaKnown RBP18.44■□□□□ 0.54
SMPD1-205ENST00000531303 AVL9Q8NBF6 648 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 OR2L8Q8NGY9 312 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 OR56A3Q8NH54 315 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 TRPC4APQ8TEL6 797 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 SETD7Q8WTS6 366 aaKnown RBP18.44■□□□□ 0.54
SMPD1-205ENST00000531303 ZFPM2Q8WW38 1151 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 ACAT2Q9BWD1 397 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 RAB11FIP5Q9BXF6 653 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 SLC32A1Q9H598 525 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 CCDC177Q9NQR7 707 aaPredicted RBP18.44■□□□□ 0.54
SMPD1-205ENST00000531303 INTS7Q9NVH2 962 aaKnown RBP18.44■□□□□ 0.54
SMPD1-205ENST00000531303 PCTPQ9UKL6 214 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 PADI4Q9UM07 663 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 ASXL3Q9C0F0 2248 aa18.44■□□□□ 0.54
SMPD1-205ENST00000531303 RP1P56715 2156 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 CPED1A4D0V7 1026 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 OR6C74A6NCV1 312 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 K7EPI3 171 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 E2F3O00716 465 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 PPP6CO00743 305 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 CDX4O14627 284 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-205ENST00000531303 ITM2AO43736 263 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 H2AFYO75367 372 aaKnown RBP18.43■□□□□ 0.54
SMPD1-205ENST00000531303 ERGP11308 486 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 ARL1P40616 181 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-205ENST00000531303 GTF2H2Q13888 395 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 NR0B2Q15466 257 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 RBBP7Q16576 425 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 GTF2H2CQ6P1K8 395 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 GOLGA7Q7Z5G4 137 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 RBM12BQ8IXT5 1001 aaKnown RBP18.43■□□□□ 0.54
SMPD1-205ENST00000531303 LRRC56Q8IYG6 542 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-205ENST00000531303 Q8N9G6 341 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-205ENST00000531303 ZNF483Q8TF39 744 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-205ENST00000531303 SMPDL3AQ92484 453 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 PHOX2BQ99453 314 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 GSTO2Q9H4Y5 243 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 DNAJC11Q9NVH1 559 aa18.43■□□□□ 0.54
SMPD1-205ENST00000531303 DNAAF2Q9NVR5 837 aaKnown RBP18.43■□□□□ 0.54
SMPD1-205ENST00000531303 TCP11X1B4DZS4 312 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 BTN3A3O00478 584 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 HSPA4LO95757 839 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 CHRNGP07510 517 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 ZNF883P0CG24 379 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 POLR2CP19387 275 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-205ENST00000531303 PSMB5P28074 263 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 ALDH4A1P30038 563 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 ABCE1P61221 599 aaKnown RBP18.42■□□□□ 0.54
SMPD1-205ENST00000531303 GNGT1P63211 74 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 CLCQ05315 142 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 AASDHQ4L235 1098 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-205ENST00000531303 ATG16L1Q676U5 607 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 FRMD7Q6ZUT3 714 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 LRRC70Q7Z2Q7 622 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 OR4K3Q96R72 315 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 CAPS2Q9BXY5 557 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 NOL11Q9H8H0 719 aaKnown RBP18.42■□□□□ 0.54
SMPD1-205ENST00000531303 TMEM9BQ9NQ34 198 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 SPHK1Q9NYA1 384 aa18.42■□□□□ 0.54
SMPD1-205ENST00000531303 SNRNP200O75643 2136 aaKnown RBP18.42■□□□□ 0.54
SMPD1-205ENST00000531303 GSAPA4D1B5 854 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 ISM1B1AKI9 464 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 CHRM5P08912 532 aaPredicted RBP18.41■□□□□ 0.54
SMPD1-205ENST00000531303 AMD1P17707 334 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 GRK2P25098 689 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 ARRB2P32121 409 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 SLC1A6P48664 564 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 RCN2Q14257 317 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 ARL13AQ5H913 290 aaPredicted RBP18.41■□□□□ 0.54
SMPD1-205ENST00000531303 PRAMEF13Q5VWM6 474 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 FAM47EQ6ZV65 393 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 ADGRF3Q8IZF5 1079 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 DCBLD1Q8N8Z6 715 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 OR6Y1Q8NGX8 325 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 RHBDD1Q8TEB9 315 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 ATP6V1E2Q96A05 226 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 CNDP1Q96KN2 507 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 SGPP1Q9BX95 441 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 C1QTNF3Q9BXJ4 246 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.41■□□□□ 0.54
SMPD1-205ENST00000531303 C20orf27Q9GZN8 174 aa18.41■□□□□ 0.54
SMPD1-205ENST00000531303 IPPKQ9H8X2 491 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms