RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CRISPLD2Q9H0B8 497 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 ABCG8Q9H221 673 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 CCL26Q9Y258 94 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 NRG2O14511 850 aaPredicted RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 PER2O15055 1255 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 PCNAP12004 261 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 SDC1P18827 310 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 RPL10P27635 214 aaKnown RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 GZMMP51124 257 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 EPHA5P54756 1037 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 ABRQ12979 859 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 CSTF3Q12996 717 aaKnown RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 PLA2G4EQ3MJ16 856 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 DNAJC14Q6Y2X3 702 aaPredicted RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 GCNT7Q6ZNI0 430 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 DET1Q7L5Y6 550 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 TRAM1L1Q8N609 369 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 CHST14Q8NCH0 376 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 DDHD1Q8NEL9 900 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 PJA1Q8NG27 643 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 CLHC1Q8NHS4 586 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 GFM2Q969S9 779 aaKnown RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 RBM4BQ9BQ04 359 aaKnown RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 HEPHQ9BQS7 1158 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 RBM4Q9BWF3 364 aaKnown RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 SLC22A14Q9Y267 594 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 TSPAN11A1L157 253 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 H0Y858 1186 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 SLCO2B1O94956 709 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 GSTM1P09488 218 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 AMD1P17707 334 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 PRPS1L1P21108 318 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 PTPN6P29350 595 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 MAPK9P45984 424 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 VEGFBP49765 207 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 NUP107P57740 925 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 PHC1P78364 1004 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 GSTM4Q03013 218 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 MTAPQ13126 283 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 PON2Q15165 354 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 RTL10Q7L3V2 364 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 ADIPOR2Q86V24 386 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 VRK3Q8IV63 474 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 FAM86B1Q8N7N1 296 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 MUS81Q96NY9 551 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 TBCDQ9BTW9 1192 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 ZSCAN5AQ9BUG6 496 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 OSBPL10Q9BXB5 764 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 CARS2Q9HA77 564 aaKnown RBP16.74■□□□□ 0.27
BRCA2-204ENST00000530893 TLR9Q9NR96 1032 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 SPHK2Q9NRA0 654 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 TBC1D14Q9P2M4 693 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 ATXN10Q9UBB4 475 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 IRAK3Q9Y616 596 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 PLXNA2O75051 1894 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 GNGT2O14610 69 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 PRKD3O94806 890 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 CCR2P41597 374 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 TRPC1P48995 793 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 PPP2R2BQ00005 443 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 KIAA0907Q7Z7F0 614 aaPredicted RBP16.74■□□□□ 0.27
BRCA2-204ENST00000530893 CLVS1Q8IUQ0 354 aaPredicted RBP16.74■□□□□ 0.27
BRCA2-204ENST00000530893 EID3Q8N140 333 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 ZCCHC7Q8N3Z6 543 aaKnown RBP16.74■□□□□ 0.27
BRCA2-204ENST00000530893 ATL1Q8WXF7 558 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 ELMO1Q92556 727 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 NCLNQ969V3 563 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 ISOC1Q96CN7 298 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 CD84Q9UIB8 345 aa16.74■□□□□ 0.27
BRCA2-204ENST00000530893 MBD1Q9UIS9 605 aaPredicted RBP16.74■□□□□ 0.27
BRCA2-204ENST00000530893 CCL16O15467 120 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 TIMP1P01033 207 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 TYRP14679 529 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 CSF2RAP15509 400 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 TCF3P15923 654 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 NNMTP40261 264 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 NEK2P51955 445 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 PFN3P60673 137 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 SRSF11Q05519 484 aaKnown RBP16.73■□□□□ 0.27
BRCA2-204ENST00000530893 BIRC2Q13490 618 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 NKG7Q16617 165 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 GTDC1Q4AE62 458 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 ARHGAP15Q53QZ3 475 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 RBM48Q5RL73 367 aaKnown RBP16.73■□□□□ 0.27
BRCA2-204ENST00000530893 NOXRED1Q6NXP6 359 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 CYP2U1Q7Z449 544 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 THAP5Q7Z6K1 395 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 SERPINA11Q86U17 422 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 PHACTR4Q8IZ21 702 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 HCAR2Q8TDS4 363 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 STARD8Q92502 1023 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 PYCR2Q96C36 320 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 LRIG1Q96JA1 1093 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 TSSK3Q96PN8 268 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 DOK1Q99704 481 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 ING2Q9H160 280 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 CXorf21Q9HAI6 301 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 HPS4Q9NQG7 708 aa16.73■□□□□ 0.27
BRCA2-204ENST00000530893 TDP1Q9NUW8 608 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms