RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ARFGEF2Q9Y6D5 1785 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 TCRBV7S3A2A0A539 114 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 OR51F1A6NGY5 319 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 HAS3O00219 553 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 INPPL1O15357 1258 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 PIK3CBP42338 1070 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 XKP51811 444 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 TAS2R39P59534 338 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ABATP80404 500 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 QSOX2Q6ZRP7 698 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 HIST1H2AAQ96QV6 131 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 CHCHD6Q9BRQ6 235 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 TVP23BQ9NYZ1 205 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 CDC14AQ9UNH5 594 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 A0A1W2PRG6 482 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 DCLK1O15075 740 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 CYB5AP00167 134 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 PIM1P11309 404 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 CCL5P13501 91 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 KCNE1P15382 129 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 AGXTP21549 392 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ALDH3A2P51648 485 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 CHRNA6Q15825 494 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 IDNKQ5T6J7 187 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 PRR23BQ6ZRT6 265 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 SLC29A4Q7RTT9 530 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ADGRG6Q86SQ4 1221 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 GKN2Q86XP6 184 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 GPALPP1Q8IXQ4 340 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 AVL9Q8NBF6 648 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 CAMKVQ8NCB2 501 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 MED28Q9H204 178 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 DENND2DQ9H6A0 471 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 TCF7L1Q9HCS4 588 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ITM2CQ9NQX7 267 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ZDHHC18Q9NUE0 388 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 NALCNQ8IZF0 1738 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 XRN1Q8IZH2 1706 aaKnown RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 TULP2O00295 520 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ITM2AO43736 263 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 TMEM63AO94886 807 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ZNF20P17024 532 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 GDI1P31150 447 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 DNAJA1P31689 397 aaKnown RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 FBXL22Q6P050 247 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 RASGRP3Q8IV61 690 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 NXPE1Q8N323 547 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ANKFN1Q8N957 763 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 PIWIL1Q96J94 861 aaKnown RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 EFCAB11Q9BUY7 163 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 CST11Q9H112 138 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 SERINC1Q9NRX5 453 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 PIGVQ9NUD9 493 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 SLC17A6Q9P2U8 582 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 CDH7Q9ULB5 785 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 GRIP1Q9Y3R0 1128 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 INSL6Q9Y581 213 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 PCDHGB1Q9Y5G3 927 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 DAPL1A0PJW8 107 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 A8MT66 165 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 UPK3BL1B0FP48 263 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 UPK3BL2E5RIL1 263 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 PSMD9O00233 223 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 HAPLN1P10915 354 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ACP5P13686 325 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 BTN3A2P78410 334 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 SCN1BQ07699 218 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 NFATC2Q13469 925 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 PUM1Q14671 1186 aaKnown RBP eCLIP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 IQCCQ4KMZ1 466 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 TNFAIP8L2Q6P589 184 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 TRMT10BQ6PF06 316 aaKnown RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 LINGO2Q7L985 606 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 LYSMD3Q7Z3D4 306 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 CAND1Q86VP6 1230 aaKnown RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 OR10G2Q8NGC3 310 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 ACOT12Q8WYK0 555 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 DERL2Q9GZP9 239 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 TBC1D17Q9HA65 648 aa8.29□□□□□ -1.08
CTNND1-227ENST00000530748 NLE1Q9NVX2 485 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-227ENST00000530748 FAM240BA0A1B0GVZ2 78 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 M0R2N6 131 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 AREL1O15033 823 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 TBX18O95935 607 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 MT-ND1P03886 318 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 PFKMP08237 780 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 ENGP17813 658 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 EFNA1P20827 205 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-227ENST00000530748 GBX2P52951 348 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-227ENST00000530748 KCNC3Q14003 757 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 PDCD4Q53EL6 469 aaKnown RBP8.28□□□□□ -1.08
CTNND1-227ENST00000530748 SLC9A4Q6AI14 798 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 SLC9B2Q86UD5 537 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 OR5T3Q8NGG3 340 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 SLC35B2Q8TB61 432 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 GRHL3Q8TE85 626 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 GEMIN6Q8WXD5 167 aaKnown RBP8.28□□□□□ -1.08
CTNND1-227ENST00000530748 BRI3BPQ8WY22 251 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 CEP295NLQ96MC4 621 aa8.28□□□□□ -1.08
CTNND1-227ENST00000530748 MTERF1Q99551 399 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms