RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 KIR3DX1Q9H7L2 352 aa10.32□□□□□ -0.76
SOX6-213ENST00000530378 PARD6AQ9NPB6 346 aa10.32□□□□□ -0.76
SOX6-213ENST00000530378 MARCOQ9UEW3 520 aaPredicted RBP10.32□□□□□ -0.76
SOX6-213ENST00000530378 ANGPTL3Q9Y5C1 460 aa10.32□□□□□ -0.76
SOX6-213ENST00000530378 GSAPA4D1B5 854 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 TMEM233B4DJY2 109 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 E7ENX8 843 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 STX16-NPEPL1H3BU86 382 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 E2F3O00716 465 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 STX16O14662 325 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 KATNA1O75449 491 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 VIMP08670 466 aaKnown RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 KITP10721 976 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 SLC2A4P14672 509 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 XRCC1P18887 633 aaPredicted RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 MPSTP25325 297 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 PRDX3P30048 256 aaKnown RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 SLC6A12P48065 614 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 RAB28P51157 221 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 SEC24CP53992 1094 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 DNAJB13P59910 316 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 PPP1CAP62136 330 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 CBX1P83916 185 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 CDKL1Q00532 357 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 TAP2Q03519 686 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 STX3Q13277 289 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 GTF2H2Q13888 395 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 C14orf28Q4W4Y0 310 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 ANKS6Q68DC2 871 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 GTF2H2CQ6P1K8 395 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 FRMD7Q6ZUT3 714 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 MTERF4Q7Z6M4 381 aaKnown RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 TRIM73Q86UV7 250 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 THOC6Q86W42 341 aaKnown RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 MYLK4Q86YV6 388 aaPredicted RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 ARL10Q8N8L6 244 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 Q8N9G6 341 aaPredicted RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 FBXO15Q8NCQ5 510 aaPredicted RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 OR52B6Q8NGF0 335 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 ZNF483Q8TF39 744 aaPredicted RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 UBTD2Q8WUN7 234 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 RSC1A1Q92681 617 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 CCDC126Q96EE4 140 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 L3HYPDHQ96EM0 354 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 PRRX2Q99811 253 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 EDEM2Q9BV94 578 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 ZMYND15Q9H091 742 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 SRMSQ9H3Y6 488 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 NOL11Q9H8H0 719 aaKnown RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 ZBTB26Q9HCK0 441 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 TNFRSF12AQ9NP84 129 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 CCDC177Q9NQR7 707 aaPredicted RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 POT1Q9NUX5 634 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 INTS7Q9NVH2 962 aaKnown RBP10.31□□□□□ -0.76
SOX6-213ENST00000530378 SPHK1Q9NYA1 384 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 TAC3Q9UHF0 121 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 POLG2Q9UHN1 485 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 LNPEPQ9UIQ6 1025 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 ADAM21Q9UKJ8 722 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 RNF215Q9Y6U7 377 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 GVINP1Q7Z2Y8 2422 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 DMXL1Q9Y485 3027 aa10.31□□□□□ -0.76
SOX6-213ENST00000530378 CPED1A4D0V7 1026 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 OR6C74A6NCV1 312 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 OR5K4A6NMS3 321 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 BTN3A3O00478 584 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 UBFD1O14562 309 aaKnown RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 LMNAP02545 664 aaKnown RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 POLR2CP19387 275 aaPredicted RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 PEBP1P30086 187 aaKnown RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 LSP1P33241 339 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 SLC1A6P48664 564 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 HNMTP50135 292 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 ABCE1P61221 599 aaKnown RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 CLCQ05315 142 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 RCN2Q14257 317 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 ARL13AQ5H913 290 aaPredicted RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 NKAIN2Q5VXU1 208 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 TMEM26Q6ZUK4 368 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 ZNF438Q7Z4V0 828 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 AMIGO1Q86WK6 493 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 LRRC56Q8IYG6 542 aaPredicted RBP10.3□□□□□ -0.76
SOX6-213ENST00000530378 LRRC34Q8IZ02 419 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 LSMEM2Q8N112 164 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 TCAIMQ8N3R3 496 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 GPR156Q8NFN8 814 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 ATL1Q8WXF7 558 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 ATP6V1E2Q96A05 226 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 APOLD1Q96LR9 279 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 OR4K3Q96R72 315 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 KCNA7Q96RP8 456 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 SORT1Q99523 831 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 SYNDIG1Q9H7V2 258 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 SEMA4GQ9NTN9 838 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 DNAJC11Q9NVH1 559 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 FGFR1OP2Q9NVK5 253 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 NLGN3Q9NZ94 848 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 TMCO1Q9UM00 188 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 KLHL20Q9Y2M5 609 aa10.3□□□□□ -0.76
SOX6-213ENST00000530378 CSNK1G3Q9Y6M4 447 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms