RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 ASB11Q8WXH4 323 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 ZNF501Q96CX3 271 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-215ENST00000528396 CLIP3Q96DZ5 547 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 LINGO1Q96FE5 620 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 PLAC1Q9HBJ0 212 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 ABCF3Q9NUQ8 709 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 MTRF1LQ9UGC7 380 aaKnown RBP12.91□□□□□ -0.34
CAPN1-215ENST00000528396 PADI1Q9ULC6 663 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 MED16Q9Y2X0 877 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 VWA7Q9Y334 891 aa12.91□□□□□ -0.34
CAPN1-215ENST00000528396 EIF4E1BA6NMX2 242 aaKnown RBP12.9□□□□□ -0.34
CAPN1-215ENST00000528396 E7EQ34 232 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 MYO1CO00159 1063 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 OR2B3O76000 313 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 TIAF1O95411 115 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 KLK3P07288 261 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-215ENST00000528396 GSTA2P09210 222 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 HIST1H2AGP0C0S8 130 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-215ENST00000528396 LIFP15018 202 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 HIST1H2ADP20671 130 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 MAGP20916 626 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 GABRB3P28472 473 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 PEBP1P30086 187 aaKnown RBP12.9□□□□□ -0.34
CAPN1-215ENST00000528396 SSTR1P30872 391 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 DLSTP36957 453 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 STAT5AP42229 794 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 MAGEA4P43358 317 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 PNLIPRP1P54315 467 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 ARHGAP19Q14CB8 494 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.9□□□□□ -0.34
CAPN1-215ENST00000528396 THEMIS2Q5TEJ8 643 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 PAQR3Q6TCH7 311 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 C3orf62Q6ZUJ4 267 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 TIPARPQ7Z3E1 657 aaKnown RBP12.9□□□□□ -0.34
CAPN1-215ENST00000528396 CTAGE3PQ8IX95 158 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 SYTL1Q8IYJ3 562 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 MMGT1Q8N4V1 131 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 LMNTD1Q8N9Z9 388 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 OR1L3Q8NH93 324 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 EEF1AKMT1Q8WVE0 214 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 IFT81Q8WYA0 676 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 SMPDL3AQ92484 453 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 HIST1H2AHQ96KK5 128 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 HIST1H2AJQ99878 128 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 H2AFJQ9BTM1 129 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 MENTQ9BUN1 341 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 TRIM54Q9BYV2 358 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 PHACTR1Q9C0D0 580 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 ACTR5Q9H9F9 607 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-215ENST00000528396 MOCS1Q9NZB8 636 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 PLCL2Q9UPR0 1127 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 KLHL20Q9Y2M5 609 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 PCDHGA4Q9Y5G9 962 aa12.9□□□□□ -0.34
CAPN1-215ENST00000528396 LOC101059948A0A1B0GTJ6 334 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 FAM95CA0A1B0GW59 222 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 KRT87PA6NCN2 255 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 ZNF891A8MT65 544 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-215ENST00000528396 KATNA1O75449 491 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 CCNDBP1O95273 360 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 C8GP07360 202 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 HBQ1P09105 142 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 MSL3P1P0C860 447 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 CMPK1P30085 196 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 STX2P32856 288 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 MC1RQ01726 317 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 RHDQ02161 417 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 SRSF6Q13247 344 aaKnown RBP12.89□□□□□ -0.35
CAPN1-215ENST00000528396 SP140Q13342 867 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 TRADDQ15628 312 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 CYP2A13Q16696 494 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 DEFB110Q30KQ9 67 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 GLE1Q53GS7 698 aaKnown RBP12.89□□□□□ -0.35
CAPN1-215ENST00000528396 TAF1BQ53T94 588 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-215ENST00000528396 ZC3H12BQ5HYM0 836 aaKnown RBP12.89□□□□□ -0.35
CAPN1-215ENST00000528396 FAM20CQ8IXL6 584 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 HMGCLL1Q8TB92 370 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 DENND1AQ8TEH3 1009 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 MR1Q95460 341 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 UBL7Q96S82 380 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-215ENST00000528396 PKP4Q99569 1192 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 MIPEPQ99797 713 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 ACAT2Q9BWD1 397 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 SPRY4Q9C004 299 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 TSPYL1Q9H0U9 437 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 RHOJQ9H4E5 214 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 UTP6Q9NYH9 597 aaKnown RBP12.89□□□□□ -0.35
CAPN1-215ENST00000528396 KCND3Q9UK17 655 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 SSUH2Q9Y2M2 353 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 PSAT1Q9Y617 370 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 AP1M2Q9Y6Q5 423 aa12.89□□□□□ -0.35
CAPN1-215ENST00000528396 SETXQ7Z333 2677 aaKnown RBP12.89□□□□□ -0.35
CAPN1-215ENST00000528396 TCRBV9S1A1TA0A576 114 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 SLC16A5O15375 505 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 SLC16A8O95907 504 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 TCN2P20062 427 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 FDXRP22570 491 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 RPS15P62841 145 aaKnown RBP12.88□□□□□ -0.35
CAPN1-215ENST00000528396 CBLBQ13191 982 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms