RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 APRTP07741 180 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 ETS1P14921 441 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 CDH3P22223 829 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 HTR1EP28566 365 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 SSTR2P30874 369 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 GRIA1P42261 906 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 NPY2RP49146 381 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 CDK16Q00536 496 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 AIMP2Q13155 320 aaKnown RBP10.14□□□□□ -0.79
CPSF1-203ENST00000527916 SNX1Q13596 522 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 ZNF169Q14929 603 aaPredicted RBP10.14□□□□□ -0.79
CPSF1-203ENST00000527916 PCID2Q5JVF3 399 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 MLIPQ5VWP3 458 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 ARMC3Q5W041 872 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 MTFR2Q6P444 385 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 BNC2Q6ZN30 1099 aaPredicted RBP10.14□□□□□ -0.79
CPSF1-203ENST00000527916 GPR135Q8IZ08 494 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 ADGRF3Q8IZF5 1079 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 PHC3Q8NDX5 983 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 OR1L3Q8NH93 324 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 ELMO1Q92556 727 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 POM121Q96HA1 1249 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 ZNF778Q96MU6 729 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 CARD6Q9BX69 1037 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 CHRNA10Q9GZZ6 450 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 ZBTB20Q9HC78 741 aaPredicted RBP10.14□□□□□ -0.79
CPSF1-203ENST00000527916 LZTFL1Q9NQ48 299 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 PTRH2Q9Y3E5 179 aaKnown RBP10.14□□□□□ -0.79
CPSF1-203ENST00000527916 TCAF1Q9Y4C2 921 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 CCDC78A2IDD5 438 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 BHMG1C9JSJ3 638 aaPredicted RBP10.13□□□□□ -0.79
CPSF1-203ENST00000527916 BTN3A1O00481 513 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 ZNF749O43361 778 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 KDM1AO60341 852 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 JRKO75564 520 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 SNRPB2P08579 225 aaKnown RBP10.13□□□□□ -0.79
CPSF1-203ENST00000527916 ZSCAN5DPP0CG00 497 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 CAPN3P20807 821 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 SHMT2P34897 504 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 PRAMEP78395 509 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 TLR1Q15399 786 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 HIF1AQ16665 826 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 ZNF630Q2M218 657 aaPredicted RBP10.13□□□□□ -0.79
CPSF1-203ENST00000527916 FASTKD1Q53R41 847 aaKnown RBP10.13□□□□□ -0.79
CPSF1-203ENST00000527916 AARS2Q5JTZ9 985 aaKnown RBP10.13□□□□□ -0.79
CPSF1-203ENST00000527916 AGAP7PQ5VUJ5 663 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 MICALCLQ6ZW33 695 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 ZNF534Q76KX8 674 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 PRUNE1Q86TP1 453 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 ZNF808Q8N4W9 903 aaPredicted RBP10.13□□□□□ -0.79
CPSF1-203ENST00000527916 BCORP1Q8N888 145 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 OR2Y1Q8NGV0 311 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 OR6P1Q8NGX9 317 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 OR5K2Q8NHB8 316 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 ITLN2Q8WWU7 325 aaPredicted RBP10.13□□□□□ -0.79
CPSF1-203ENST00000527916 N4BP2L2Q92802 583 aaPredicted RBP10.13□□□□□ -0.79
CPSF1-203ENST00000527916 PTERQ96BW5 349 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 PPM1MQ96MI6 270 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 AGAP4Q96P64 663 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 SLX1AQ9BQ83 275 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 TSSK1BQ9BXA7 367 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 IL22Q9GZX6 179 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 EPS8L2Q9H6S3 715 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 OLAHQ9NV23 265 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 ACTR10Q9NZ32 417 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 OR6C2Q9NZP2 312 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 SLC2A6Q9UGQ3 507 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 NDOR1Q9UHB4 597 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 ANAPC5Q9UJX4 755 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 ASF1AQ9Y294 204 aa10.13□□□□□ -0.79
CPSF1-203ENST00000527916 GSAPA4D1B5 854 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 NRDCO43847 1150 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 OR1I1O60431 355 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 GPC4O75487 556 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 FGGP02679 453 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 ST6GAL1P15907 406 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 TTPAP49638 278 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 CCZ1BP86790 482 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 CCZ1P86791 482 aaPredicted RBP10.12□□□□□ -0.79
CPSF1-203ENST00000527916 PRKG2Q13237 762 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 TESK1Q15569 626 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 DNAJC21Q5F1R6 531 aaKnown RBP10.12□□□□□ -0.79
CPSF1-203ENST00000527916 ZNF789Q5FWF6 425 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 FBXO38Q6PIJ6 1188 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 SPESP1Q6UW49 350 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 RPTNQ6XPR3 784 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 UNC5AQ6ZN44 842 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 GSTA5Q7RTV2 222 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 MRGPRGQ86SM5 289 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 SLC22A15Q8IZD6 547 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 MPP5Q8N3R9 675 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.12□□□□□ -0.79
CPSF1-203ENST00000527916 PPHLN1Q8NEY8 458 aaKnown RBP10.12□□□□□ -0.79
CPSF1-203ENST00000527916 OR5AR1Q8NGP9 310 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 ASZ1Q8WWH4 475 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 NACC2Q96BF6 587 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 CNDP1Q96KN2 507 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 OR2A14Q96R47 310 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 AP1M1Q9BXS5 423 aa10.12□□□□□ -0.79
CPSF1-203ENST00000527916 TRIM8Q9BZR9 551 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms