RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TNFP01375 233 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 LRP8Q14114 963 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 SQLEQ14534 574 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 KPNB1Q14974 876 aaKnown RBP18.25■□□□□ 0.51
SMPD1-203ENST00000527275 WDR37Q9Y2I8 494 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 TIMM22Q9Y584 194 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 PTGDR2Q9Y5Y4 395 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 A0A088AWK7 358 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 AIM2O14862 343 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 KCNJ13O60928 360 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 UROSP10746 265 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 CLCNKAP51800 687 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 ZRSR2Q15696 482 aaKnown RBP18.25■□□□□ 0.51
SMPD1-203ENST00000527275 PRAMEF14Q5SWL7 426 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 GPRIN3Q6ZVF9 776 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 UBE2R2Q712K3 238 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-203ENST00000527275 DEFB107AQ8IZN7 70 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 WDR60Q8WVS4 1066 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 EGFL8Q99944 293 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 NOL11Q9H8H0 719 aaKnown RBP18.25■□□□□ 0.51
SMPD1-203ENST00000527275 PILRBQ9UKJ0 227 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 ACSL5Q9ULC5 683 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 WDR87Q6ZQQ6 2873 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 ARHGEF17Q96PE2 2063 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PRR33A8MZF0 331 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 TAPBPO15533 448 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PEX11AO75192 247 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 C8GP07360 202 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 LINC00032P0C843 101 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 ACADLP28330 430 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 NXPH1P58417 271 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 SIM2Q14190 667 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-203ENST00000527275 SLC30A9Q6PML9 568 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PHACTR4Q8IZ21 702 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 ZNF382Q96SR6 550 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 SLC12A9Q9BXP2 914 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 NUSAP1Q9BXS6 441 aaKnown RBP18.24■□□□□ 0.51
SMPD1-203ENST00000527275 RDH14Q9HBH5 336 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PRDM8Q9NQV8 689 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 BTRCQ9Y297 605 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PCDHGA2Q9Y5H1 932 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 KRT87PA6NCN2 255 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 CIB2O75838 187 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 GNSP15586 552 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 JUNDP17535 347 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 IDSP22304 550 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 ACTR1BP42025 376 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 BLKP51451 505 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PKNOX1P55347 436 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 ACTR1AP61163 376 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 GTF2H2Q13888 395 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 SULT1C3Q6IMI6 304 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 GTF2H2CQ6P1K8 395 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 EFL1Q7Z2Z2 1120 aaKnown RBP18.24■□□□□ 0.51
SMPD1-203ENST00000527275 GOLGA7Q7Z5G4 137 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PDZD3Q86UT5 571 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PIGKQ92643 395 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PARVBQ9HBI1 364 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 TBC1D29Q9UFV1 150 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 SLC7A8Q9UHI5 535 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 PDE10AQ9Y233 779 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 L3MBTL1Q9Y468 752 aa18.24■□□□□ 0.51
SMPD1-203ENST00000527275 CFAP20Q9Y6A4 193 aaKnown RBP18.24■□□□□ 0.51
SMPD1-203ENST00000527275 A0A1B0GTW7 788 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 PDZK1P1A8MUH7 402 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 PSMD12O00232 456 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-203ENST00000527275 PSIP1O75475 530 aaKnown RBP18.23■□□□□ 0.51
SMPD1-203ENST00000527275 OR4F21O95013 312 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 CHEK2O96017 543 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 SLC35G4P0C7Q5 338 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 HSPA7P48741 367 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 RPIAP49247 311 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 C21orf59P57076 290 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 CDC16Q13042 620 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 PRRT3Q5FWE3 981 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 PRR23BQ6ZRT6 265 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 NET1Q7Z628 596 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-203ENST00000527275 RASGRP3Q8IV61 690 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 KYQ8NBH2 561 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 OR52B6Q8NGF0 335 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 FOPNLQ96NB1 174 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 ZDHHC5Q9C0B5 715 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 RNPEPL1Q9HAU8 725 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 APOBEC3BQ9UH17 382 aaKnown RBP18.23■□□□□ 0.51
SMPD1-203ENST00000527275 CABIN1Q9Y6J0 2220 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 TNRC6BQ9UPQ9 1833 aaKnown RBP18.23■□□□□ 0.51
SMPD1-203ENST00000527275 A0A1B0GVT2 93 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 GALR2O43603 387 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-203ENST00000527275 VPS4BO75351 444 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 CSF2P04141 144 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 CELA2BP08218 269 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-203ENST00000527275 NME1P15531 152 aaKnown RBP18.23■□□□□ 0.51
SMPD1-203ENST00000527275 NUDT2P50583 147 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 ERVPABLB-1P60509 514 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 ILF3Q12906 894 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMPD1-203ENST00000527275 C6orf163Q5TEZ5 329 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 MBOAT1Q6ZNC8 495 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 NRROSQ86YC3 692 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 GPBAR1Q8TDU6 330 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 TFGQ92734 400 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms