RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CBSP35520 551 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 CD97P48960 835 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 EIF3BP55884 814 aaKnown RBP12.88□□□□□ -0.35
CAPN1-207ENST00000527189 GPS1Q13098 491 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 GBX1Q14549 363 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 NAA25Q14CX7 972 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 CYP1B1Q16678 543 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 NKAIN1Q4KMZ8 207 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 MLIPQ5VWP3 458 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 MRPL14Q6P1L8 145 aaKnown RBP12.88□□□□□ -0.35
CAPN1-207ENST00000527189 FIGLAQ6QHK4 219 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 CAND1Q86VP6 1230 aaKnown RBP12.88□□□□□ -0.35
CAPN1-207ENST00000527189 MCATQ8IVS2 390 aaKnown RBP12.88□□□□□ -0.35
CAPN1-207ENST00000527189 OTUD6BQ8N6M0 293 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 ZNF655Q8N720 491 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-207ENST00000527189 LMNTD1Q8N9Z9 388 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 LPGAT1Q92604 370 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 MAGOHBQ96A72 148 aaKnown RBP12.88□□□□□ -0.35
CAPN1-207ENST00000527189 PTERQ96BW5 349 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 FER1L6-AS2Q96M78 137 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 XAB2Q9HCS7 855 aaKnown RBP12.88□□□□□ -0.35
CAPN1-207ENST00000527189 INTS10Q9NVR2 710 aaKnown RBP12.88□□□□□ -0.35
CAPN1-207ENST00000527189 IL1RAPL1Q9NZN1 696 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 SAMD15Q9P1V8 674 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 IFT80Q9P2H3 777 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-207ENST00000527189 KLHL42Q9P2K6 505 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 NDOR1Q9UHB4 597 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 LRBAP50851 2863 aa12.88□□□□□ -0.35
CAPN1-207ENST00000527189 SPTBN1Q01082 2364 aaKnown RBP12.87□□□□□ -0.35
CAPN1-207ENST00000527189 MATN4O95460 622 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 ALBP02768 609 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 PDGFAP04085 211 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 CHRM3P20309 590 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 FMO4P31512 558 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 FOLR3P41439 243 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 GCGRP47871 477 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 GRM7Q14831 915 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 TRIP13Q15645 432 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-207ENST00000527189 DEFB110Q30KQ9 67 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 FAM214AQ32MH5 1076 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 CTSL3PQ5NE16 218 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 CPZQ66K79 652 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 NEPROQ6NW34 567 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 CES3Q6UWW8 571 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 CILP2Q8IUL8 1156 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 OR2Y1Q8NGV0 311 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 SKA2Q8WVK7 121 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-207ENST00000527189 MIB2Q96AX9 1013 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 ZNF285Q96NJ3 590 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 IL17FQ96PD4 163 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 IRAK4Q9NWZ3 460 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 SPATA7Q9P0W8 599 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 DHCR7Q9UBM7 475 aaKnown RBP12.87□□□□□ -0.35
CAPN1-207ENST00000527189 NBASA2RRP1 2371 aa12.87□□□□□ -0.35
CAPN1-207ENST00000527189 SPENQ96T58 3664 aaKnown RBP12.86□□□□□ -0.35
CAPN1-207ENST00000527189 PEX12O00623 359 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 DPM1O60762 260 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 AVILO75366 819 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 PKMP14618 531 aaKnown RBP12.86□□□□□ -0.35
CAPN1-207ENST00000527189 ALAS2P22557 587 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 HSD17B2P37059 387 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 COILP38432 576 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-207ENST00000527189 GRIA3P42263 894 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 CHAF1BQ13112 559 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 DHX34Q14147 1143 aaKnown RBP12.86□□□□□ -0.35
CAPN1-207ENST00000527189 ARHGAP19Q14CB8 494 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 IGFBP7Q16270 282 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 CYP2A13Q16696 494 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 ANKRD20A4Q4UJ75 823 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 C1orf189Q5VU69 101 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 FCRL6Q6DN72 434 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 TTC27Q6P3X3 843 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 CASC4Q6P4E1 433 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 CCDC137Q6PK04 289 aaKnown RBP12.86□□□□□ -0.35
CAPN1-207ENST00000527189 NEK10Q6ZWH5 1172 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 CENPUQ71F23 418 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 ATCAYQ86WG3 371 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 C2orf73Q8N5S3 287 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-207ENST00000527189 FDCSPQ8NFU4 85 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 ACTRT1Q8TDG2 376 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 GRK7Q8WTQ7 553 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 FKBP10Q96AY3 582 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 SMAD5Q99717 465 aaKnown RBP12.86□□□□□ -0.35
CAPN1-207ENST00000527189 GPR83Q9NYM4 423 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 C5AR2Q9P296 337 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 CRYL1Q9Y2S2 319 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 PTRH2Q9Y3E5 179 aaKnown RBP12.86□□□□□ -0.35
CAPN1-207ENST00000527189 NEU2Q9Y3R4 380 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 NFS1Q9Y697 457 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 MED13Q9UHV7 2174 aa12.86□□□□□ -0.35
CAPN1-207ENST00000527189 A0A1B0GX78 115 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 FITM1A5D6W6 292 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 GOLGA8KD6RF30 607 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 E5RI56 91 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 GOLGA8TH3BQL2 631 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 PGRMC1O00264 195 aaKnown RBP12.85□□□□□ -0.35
CAPN1-207ENST00000527189 CES2O00748 559 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 ZNF185O15231 689 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 NIPSNAP2O75323 286 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms