RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 DHRS7Q9Y394 339 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 KLK4Q9Y5K2 254 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 HEMK1Q9Y5R4 338 aaPredicted RBP19.85■□□□□ 0.77
VPS28-206ENST00000526734 CDC14CA4D256 554 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 H3BMH7 237 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 MYO1CO00159 1063 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 PRICKLE3O43900 615 aaPredicted RBP19.84■□□□□ 0.77
VPS28-206ENST00000526734 VPS26AO75436 327 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 ERGP11308 486 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 BBS9Q3SYG4 887 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 HIBCHQ6NVY1 386 aaPredicted RBP19.84■□□□□ 0.77
VPS28-206ENST00000526734 GALNT7Q86SF2 657 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 CNTN4Q8IWV2 1026 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 C2CD4AQ8NCU7 369 aaPredicted RBP19.84■□□□□ 0.77
VPS28-206ENST00000526734 OR9A1PQ8NGU1 263 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 DLG3Q92796 817 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 INPP5DQ92835 1189 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 FAM136AQ96C01 138 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 AARSD1Q9BTE6 412 aaKnown RBP19.84■□□□□ 0.77
VPS28-206ENST00000526734 AKIRIN1Q9H9L7 192 aaPredicted RBP19.84■□□□□ 0.77
VPS28-206ENST00000526734 ENAMQ9NRM1 1142 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 IARS2Q9NSE4 1012 aaKnown RBP19.84■□□□□ 0.77
VPS28-206ENST00000526734 EURLQ9NYK6 297 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 RUVBL2Q9Y230 463 aaKnown RBP19.84■□□□□ 0.77
VPS28-206ENST00000526734 PADI2Q9Y2J8 665 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 KCNMB2Q9Y691 235 aa19.84■□□□□ 0.77
VPS28-206ENST00000526734 FASNP49327 2511 aaKnown RBP19.83■□□□□ 0.77
VPS28-206ENST00000526734 ARHGEF33A8MVX0 844 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 SKIV2L2P42285 1042 aaKnown RBP19.83■□□□□ 0.77
VPS28-206ENST00000526734 ARL4CP56559 192 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 NFATC3Q12968 1075 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 HIF1AQ16665 826 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 DEFB110Q30KQ9 67 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 TCTE1Q5JU00 501 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 ATP1A1-AS1Q5TC04 95 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 PRAMEF17Q5VTA0 474 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 YOD1Q5VVQ6 348 aaPredicted RBP19.83■□□□□ 0.77
VPS28-206ENST00000526734 ZNF549Q6P9A3 640 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 FAM198BQ6UWH4 519 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 TAX1BP1Q86VP1 789 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 APLFQ8IW19 511 aaPredicted RBP19.83■□□□□ 0.77
VPS28-206ENST00000526734 BBOF1Q8ND07 529 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 C9orf43Q8TAL5 461 aaPredicted RBP19.83■□□□□ 0.77
VPS28-206ENST00000526734 SMPDL3AQ92484 453 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 CERS2Q96G23 380 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 NDC1Q9BTX1 674 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 TXLNGQ9NUQ3 528 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 IRAK4Q9NWZ3 460 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 CIDEBQ9UHD4 219 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 CORO1CQ9ULV4 474 aaPredicted RBP19.83■□□□□ 0.77
VPS28-206ENST00000526734 SNX7Q9UNH6 387 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 MAN2B2Q9Y2E5 1009 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 MED16Q9Y2X0 877 aa19.83■□□□□ 0.77
VPS28-206ENST00000526734 SMG1Q96Q15 3661 aaKnown RBP19.82■□□□□ 0.76
VPS28-206ENST00000526734 TTI1O43156 1089 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 SEC31AO94979 1220 aaKnown RBP19.82■□□□□ 0.76
VPS28-206ENST00000526734 PMS2P54278 862 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 ARSFP54793 590 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 MPP1Q00013 466 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 FRG1Q14331 258 aaKnown RBP19.82■□□□□ 0.76
VPS28-206ENST00000526734 NCF4Q15080 339 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 CCSMST1Q4G0I0 132 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 ZNF385CQ66K41 422 aaPredicted RBP19.82■□□□□ 0.76
VPS28-206ENST00000526734 FIGLAQ6QHK4 219 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 MCATQ8IVS2 390 aaKnown RBP19.82■□□□□ 0.76
VPS28-206ENST00000526734 C2orf73Q8N5S3 287 aaPredicted RBP19.82■□□□□ 0.76
VPS28-206ENST00000526734 ENDOVQ8N8Q3 282 aaKnown RBP19.82■□□□□ 0.76
VPS28-206ENST00000526734 GIMAP7Q8NHV1 300 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 CD200R1Q8TD46 325 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 GPR21Q99679 349 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 TAS2R13Q9NYV9 303 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 ANKMY1Q9P2S6 941 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 GALPQ9UBC7 116 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 TRMT6Q9UJA5 497 aaKnown RBP19.82■□□□□ 0.76
VPS28-206ENST00000526734 TCFL5Q9UL49 500 aa19.82■□□□□ 0.76
VPS28-206ENST00000526734 PIEZO2Q9H5I5 2752 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 EFCAB8A8MWE9 144 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 MKRN2OSH3BPM6 223 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 RFPL1O75677 317 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 HAUS5O94927 633 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 CCNDBP1O95273 360 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 PLA2G2AP14555 144 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 CMPK1P30085 196 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 GRIA3P42263 894 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 RGS4P49798 205 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 ITGA8P53708 1063 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 PTCHD3Q3KNS1 767 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 MSS51Q4VC12 460 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.81■□□□□ 0.76
VPS28-206ENST00000526734 OR2L3Q8NG85 312 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 OR2A1Q8NGT9 310 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 ASB11Q8WXH4 323 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 RUFY1Q96T51 708 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 TRIM51Q9BSJ1 452 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 SPRTNQ9H040 489 aaPredicted RBP19.81■□□□□ 0.76
VPS28-206ENST00000526734 UTP6Q9NYH9 597 aaKnown RBP19.81■□□□□ 0.76
VPS28-206ENST00000526734 ZC3H7BQ9UGR2 993 aaKnown RBP19.81■□□□□ 0.76
VPS28-206ENST00000526734 TSR3Q9UJK0 312 aaKnown RBP19.81■□□□□ 0.76
VPS28-206ENST00000526734 CFAP46Q8IYW2 2715 aa19.81■□□□□ 0.76
VPS28-206ENST00000526734 FAM187AA6NFU0 413 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms