RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TAF10Q12962 218 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 BIRC2Q13490 618 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 CDH18Q13634 790 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 FAM98BQ52LJ0 330 aaKnown RBP1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 GKAP1Q5VSY0 366 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 OLFML2AQ68BL7 652 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 REG3GQ6UW15 175 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 ZC3H3Q8IXZ2 948 aaKnown RBP1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 C9orf43Q8TAL5 461 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 CEP295NLQ96MC4 621 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 FNDC11Q9BVV2 318 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 HOXD1Q9GZZ0 328 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 PLCL2Q9UPR0 1127 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 IGLV4-3A0A075B6K6 122 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 C2orf81A6NN90 581 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 HEPACAM2A8MVW5 462 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 XRCC3O43542 346 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 SRPRAP08240 638 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 ATP6V1B1P15313 513 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 CSTF2P33240 577 aaKnown RBP eCLIP1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 SOX3P41225 446 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 CCT5P48643 541 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 CAMPP49913 170 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 CASP6P55212 293 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 SPDYCQ5MJ68 293 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 ZER1Q7Z7L7 766 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 PHC2Q8IXK0 858 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 NPEPL1Q8NDH3 523 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 OR2AJ1Q8NGZ0 328 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 SCLT1Q96NL6 688 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 OVOL2Q9BRP0 275 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 LMF2Q9BU23 707 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 TEX13BQ9BXU2 312 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 PARLQ9H300 379 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 DPAGT1Q9H3H5 408 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 PDFQ9HBH1 243 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 PREBQ9HCU5 417 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 SERINC1Q9NRX5 453 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 FAM207AQ9NSI2 230 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 C19orf25Q9UFG5 118 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 DGKBQ9Y6T7 804 aa1.96□□□□□ -2.1
ECHDC1-219ENST00000526299 SNURFLB1AK76 121 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 WDPCPO95876 746 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 HSPA8P11142 646 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 RARGP13631 454 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 RPL35AP18077 110 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 DHODHQ02127 395 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 TBCEQ15813 527 aaPredicted RBP1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 ODF4Q2M2E3 257 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 RNLSQ5VYX0 342 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 JADE1Q6IE81 842 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 CPLX4Q7Z7G2 160 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 TEX11Q8IYF3 940 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 CCDC185Q8N715 623 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 PDILTQ8N807 584 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 MOSPD2Q8NHP6 518 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 CCDC107Q8WV48 283 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 RAD9AQ99638 391 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 ATF6BQ99941 703 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 KIFC3Q9BVG8 833 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 NYXQ9GZU5 481 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 WASH6PQ9NQA3 447 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 SPHK1Q9NYA1 384 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 ABCD2Q9UBJ2 740 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 BAIAP2L1Q9UHR4 511 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 STUB1Q9UNE7 303 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 RUSC2Q8N2Y8 1516 aa1.95□□□□□ -2.1
ECHDC1-219ENST00000526299 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 NPIPB9F8W1W9 429 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 H0YAE9 185 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 OGTO15294 1046 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 CEACAM4O75871 244 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 TPPPO94811 219 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 PRLRP16471 622 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 JAK1P23458 1154 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 GABRA5P31644 462 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 MNDAP41218 407 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 KHKP50053 298 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 ZNF177Q13360 481 aaPredicted RBP1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 ITGA7Q13683 1181 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 TAB1Q15750 504 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 ZNF79Q15937 498 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 SPECC1Q5M775 1068 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 SLC35D3Q5M8T2 416 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 ELFN2Q5R3F8 820 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 KIAA0930Q6ICG6 404 aaPredicted RBP1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 UGT3A1Q6NUS8 523 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 NCEH1Q6PIU2 408 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 FIGLAQ6QHK4 219 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 NHLRC1Q6VVB1 395 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 NSMAFQ92636 917 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 FAM218AQ96MZ4 157 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 WNT5BQ9H1J7 359 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 PPIL3Q9H2H8 161 aaKnown RBP1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 JPT2Q9H910 190 aa1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 WSB2Q9NYS7 404 aaPredicted RBP1.94□□□□□ -2.1
ECHDC1-219ENST00000526299 PCDH11YQ9BZA8 1340 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 A6NLC8 198 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 CDX4O14627 284 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms