RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 C16orf45Q96MC5 204 aaPredicted RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 PPM1MQ96MI6 270 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 LRRC3BQ96PB8 259 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 FCRL5Q96RD9 977 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 PEBP4Q96S96 227 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 MYCBPQ99417 103 aaPredicted RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 NAPGQ99747 312 aaPredicted RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 SNRNP25Q9BV90 132 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 TRMT61BQ9BVS5 477 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 TM2D2Q9BX73 214 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CALN1Q9BXU9 219 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 PLA2G2FQ9BZM2 168 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 WDR12Q9GZL7 423 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 LINC00597Q9H2U6 94 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 KCNK9Q9NPC2 374 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.49□□□□□ -1.69
USP48-211ENST00000526044 GPATCH2LQ9NWQ4 482 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 DUS2Q9NX74 493 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 DONSONQ9NYP3 566 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CWC15Q9P013 229 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 EPS15L1Q9UBC2 864 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 XPO7Q9UIA9 1087 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 STOML2Q9UJZ1 356 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 VANGL2Q9ULK5 521 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 PACSIN2Q9UNF0 486 aaPredicted RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 SNX10Q9Y5X0 201 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 SAR1BQ9Y6B6 198 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CHD9Q3L8U1 2897 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 DENND4AQ7Z401 1863 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 A0A087WV62 115 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 A0A1B0GVC2 190 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TYW5A2RUC4 315 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 LRRD1A4D1F6 860 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 C2CD4DB7Z1M9 353 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PROB1E7EW31 1015 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ANHXE9PGG2 379 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PI4K2BG5E9Z4 385 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 FAM72CH0Y354 149 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 I6L893 689 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 EEF2KO00418 725 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 TRDMT1O14717 391 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 CEP104O60308 925 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ECI2O75521 394 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PRAMEF12O95522 483 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 CER1O95813 267 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PLAUP00749 431 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ENO1P06733 434 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 CD48P09326 243 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 KRT10P13645 584 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 IL9P15248 144 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 GOT1P17174 413 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TCP1P17987 556 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 SP100P23497 879 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 IL4RP24394 825 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 GDI1P31150 447 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 SLC8A1P32418 973 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TSPAN7P41732 249 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 IFNAR2P48551 515 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 MARCKSL1P49006 195 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 CLK1P49759 484 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 ZNF84P51523 738 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TPI1P60174 286 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RPS13P62277 151 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 CFHR1Q03591 330 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ZNF91Q05481 1191 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TUBB2AQ13885 445 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 KLF9Q13886 244 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 TFDP2Q14188 446 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 DPYSL3Q14195 570 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PTK2BQ14289 1009 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PDGFRLQ15198 375 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ZNF77Q15935 545 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ETFDHQ16134 617 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 DPYSL2Q16555 572 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 C5orf22Q49AR2 442 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ANKRD20A8PQ5CZ79 823 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TFDP3Q5H9I0 405 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RABGAP1LQ5R372 815 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 MPP7Q5T2T1 576 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 SEL1L2Q5TEA6 688 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PXDC1Q5TGL8 231 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 FAM72AQ5TYM5 149 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 NADSYN1Q6IA69 706 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 FAM72DQ6L9T8 149 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RWDD4Q6NW29 188 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 FBXL22Q6P050 247 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RFWD3Q6PCD5 774 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RHBDF2Q6PJF5 856 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 C16orf89Q6UX73 402 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 MFSD7Q6UXD7 560 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 VITQ6UXI7 678 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TPGS1Q6ZTW0 290 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RFX8Q6ZV50 586 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 CYP4V2Q6ZWL3 525 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 TFAP2DQ7Z6R9 452 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TRABD2AQ86V40 505 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 FAM72BQ86X60 149 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TMEM25Q86YD3 366 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 MYLK4Q86YV6 388 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 RFX6Q8HWS3 928 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms